Gene Swoo_2983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2983 
Symbol 
ID6117298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3653055 
End bp3654320 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content47% 
IMG OID641634525 
ProductFolC bifunctional protein 
Protein accessionYP_001761349 
Protein GI170727323 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00108921 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.642049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAG CTCCAGCTAC AGATGCCAGT TTAACGCTAT GGTTAGATTA CTTGCTTGCA 
ATACACCCTA TAGAGATTGA TATGGGGTTA GCGCGCGTCT CGACGGTTGC CGATCGTCTT
GGTTTGCGAG ATTTAGGTGC GACAAAGGTT GTCACCGTTG CTGGGACTAA TGGTAAAGGT
ACCACCTGCG CCATGCTTGA GCAGATTTTG ATACAGGCAG GGTACACGCT TGGTGTATAC
AGCTCTCCTC ATATTCTGAA ATACAATGAA CGCGTGCGGA TCAATGGTGA GGATGCATCA
GATAGTCGTC TAATTGAGGC TTTTGCAGCT ATAAATGTTG CTAGAGAGGA TATCTCTTTA
AGTTTTTTTG AGTTTGCAAC ACTCACGGGC CTCTATCTTT TTAAAGCTGA TAAGTTAGAT
ATTATCTTGC TTGAAGTAGG CTTAGGCGGG AGGTTAGATG CAACAAATAT TATCGATTCC
GATATTGCGG TTGTCACCTC TATCGACCTT GATCATCAAG AGTACCTCGG GGATACGCGG
GACTCAGTTG CGGCAGAGAA AGCGGGTGTC TTCAGGGGCG GTAAACCCGC GGTAGTCGGT
GAGCCTGATG TTCCTGCCAG CTTATTCGAG GTGGTCAAGC GTAAAGGGGC TGAGCTCTAC
CGCGTAAATG AGCAGTTTAG CTATCATGTG AGTAAAAATA GTAGTGAAGT TTGGGATTTT
AGTGGAGTTC GTCGCTCAAT ATCAGGGTTG CCTCTGCCTC AACTGCCACT GCCTAATGCT
GCAACAGCAC TTGCTGTCAT TGAGTTAGGC TGGCCTGACA TCTGTACTGA GATAATCAAA
AAAGCCCTAG GGTCTGCTCG TTTAGAGGGA CGGCTAGAGG TCGTTTCTCA GCAACCATTA
GTGATATTAG ATGTCGCGCA TAACCCTCAC GCTGCCCGCT ATCTGGCTAC ACAGCTTAAA
CGTTTTAAAT CTAAGCGTTT ATTTGCGTTG TGTGGCATGT TAAAAGATAA AGACACGAGT
GAGGTTATCA AGGTGCTGGA AGAGCAGGTC GACTACTGGG TCTTCACAGC ACTGGAGACA
GACAGAAGTG CGGATCCTAA ACAGCTGCAG GCGGCATTAA GCGCTACAGG CTCCTCTTCA
CATTATGCTA GTCTGGGAGT TGCATGGAGT GAGCTTAGTG CTTTACTTAC TCCTGATGAT
GCCGTTATCG TGTTTGGTTC TTTTTATACC GTGGCCGAAT TTAAAGCCTT GTCACTAAAC
TGTTAA
 
Protein sequence
MPKAPATDAS LTLWLDYLLA IHPIEIDMGL ARVSTVADRL GLRDLGATKV VTVAGTNGKG 
TTCAMLEQIL IQAGYTLGVY SSPHILKYNE RVRINGEDAS DSRLIEAFAA INVAREDISL
SFFEFATLTG LYLFKADKLD IILLEVGLGG RLDATNIIDS DIAVVTSIDL DHQEYLGDTR
DSVAAEKAGV FRGGKPAVVG EPDVPASLFE VVKRKGAELY RVNEQFSYHV SKNSSEVWDF
SGVRRSISGL PLPQLPLPNA ATALAVIELG WPDICTEIIK KALGSARLEG RLEVVSQQPL
VILDVAHNPH AARYLATQLK RFKSKRLFAL CGMLKDKDTS EVIKVLEEQV DYWVFTALET
DRSADPKQLQ AALSATGSSS HYASLGVAWS ELSALLTPDD AVIVFGSFYT VAEFKALSLN
C