Gene Swoo_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2982 
Symbol 
ID6117297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3652421 
End bp3653026 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID641634524 
Productsporulation domain-containing protein 
Protein accessionYP_001761348 
Protein GI170727322 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00537786 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.573475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAGTC ATTTTCAGAA TCGTTTGGTC GGAGTTATTG TTCTTGTTGC ATTGGGAGTG 
ATTTTTTTAC CCGATATTCT CGATGGTAAA AAGGAGCATC AGGCTGAGCA GTTTGCAGAG
ATCCCCTTGC GTCCGGAAGT GGAAGCACTT GAATTACCAG ATCAAGAGTT TAAAACTGTC
GACCTGAGTG AAAAAGAGCA GGCCTTTGAG CCTGCTGCCG ACGAGTTAGA TCAATTAGTG
CAAGAGATTG AGGAAAAAGA GGCGTTGGCT CAACAGCCTT CAACTGAGGT GGCCAATAAA
GCCGTGGTTG AGAGTAAACC CGTTGAAGTG GCCACGACTC AACCTAACAA GCCCGCGGCA
TCAGCTTATA CTTTACAGCT GGGCAGTTTT AAAAATGCCT CTAACGTCAA TGGACTTGTT
AAGCAGTTGA GAGAAAAAGG CTTTACTGCT TATACTTTAC CGGAAAAGCC AGTCGATGGT
CAGTTAACAA AGGTGTTTGT TGGCCCTAAT GTGTCAAAGG CCAAGCTGCA AGCCCAAAGT
GCTGACATTA AAAAAATCAC TAAGTTGTCA GGCCGTATCG TGAGCTACGT TCCAACCGCT
TCTTAA
 
Protein sequence
MSSHFQNRLV GVIVLVALGV IFLPDILDGK KEHQAEQFAE IPLRPEVEAL ELPDQEFKTV 
DLSEKEQAFE PAADELDQLV QEIEEKEALA QQPSTEVANK AVVESKPVEV ATTQPNKPAA
SAYTLQLGSF KNASNVNGLV KQLREKGFTA YTLPEKPVDG QLTKVFVGPN VSKAKLQAQS
ADIKKITKLS GRIVSYVPTA S