| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2980 |
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| Symbol | |
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| ID | 6117295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3650187 |
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| End bp | 3651701 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634522 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001761346 |
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| Protein GI | 170727320 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.470057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.120272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGTA TTGTCGGAAT AGTTGGTCGA ACTTCGGTTA ATCAACCAAT TTATGATGCA
TTAACTGTAC TCCAGCATCG CGGTCAAGAT GCTGCTGGTA TCGTGACTGT AGATGGTAAT
GCGTTTAGAT TGCGCAAAGC CAATGGTCTG GTAAAAGACG TGTTTGAAGC TAAACATATG
CAGCGTCTAC AGGGTAAAAC GGGTATAGGG CATGTACGTT ACCCTACGGC TGGAAGTTCG
AGTGCATCGG AAGCTCAGCC TTTCTATGTT AACTCGCCAT TTGGGATCTC GCTTGCCCAT
AACGGTAACT TGACCAATAC AGTCGAATTG CACGAGCTTT TACTTAAGCG ACGCCGTCAT
GTTAATACGA CATCTGACTC AGAAGTTTTA TTAAACTTGC TCGCCGATGA GTTACAGCAG
TGCAAGAATG AGAGTTTAAG CTCTGAAGAG GTGTTTGATG CTGTTGCTAA AGTGCACTCA
TTGACACGTG GTGCATATGC GGTAACCGCT CTTATTATTG GTCAAGGGTT AGTGGCATTT
CGTGATCCTT TCGGGATCCG TCCATTGGTG TTGGGTAAAC AGGAGACTGA ACTCGGCACT
GAATATATGA TTGCCTCAGA GAGTGTTGCG CTGGATGCTG TTGGTTTTGA GCTGATGCGT
GATGTTGCAC CTGGTGAAGC GGTATACATT ACCCTTGATG GTGAGCTCTA TACTCAACAG
TGTGCACACA CGCCAAGTTA TGCTCCTTGC TTGTTTGAGT TTGTCTATTT TGCCCGTCCA
GATTCCACTA TCGATAAGGT TTCTGTCTAT GGCAGCCGTG TTAACATGGG GGCTAAATTA
GGTGAGAAGA TTAAGCGAGA GTGGGAGGAC CATGATATTG ATGTGGTTAT TCCTATTCCA
GAAACCTCTT GTGATACAGC ACTTGAGATT GCACGTCATC TGGAGCTTCC ATACCGCCAA
GGTTTTGTGA AAAATCGCTA TATTGGCCGC ACCTTTATTA TGCCTGGTCA ACAGGAGCGT
AAGAAGTCAG TACGTCGTAA ACTTAATGCT ATTGGTGTTG AGTTTAAAGG CAAAAATGTA
CTGCTTGTGG ATGATTCTGT GGTACGTGGT ACAACATCTG AGCAGATTAT TGAGATGGCT
CGTGAAGCAG GCGCTAAGAA AGTGTATTTT GCTTCTGCAG CACCAGAAAT CCGCTTCCCT
AATGTTTATG GTATCGATAT GCCAACGGCA AGTGAGCTGA TAGCCCACGG TAGAGATGTT
GATGAGATCA GTAAGATGAT TGGCGCCGAT GGGATGATCT TCCAAGATTT GGAAGATCTT
GCAGAAGCCG TTCGTATGGA AAACCCTGAG ATTAAACGTT TCGAAACTTC TGTTTTTGAT
GGTAACTATA TTACTAACGA TGTGGATCAG GCTTATCTGG ACCATATTAC AAAGTTACGT
AATGATGATG CTAAAGCGAA TCGAAGCAAA GATATCGGGA CTAACCTTGA GCTGCATAAT
GTGTGTCACC CATAA
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| Protein sequence | MCGIVGIVGR TSVNQPIYDA LTVLQHRGQD AAGIVTVDGN AFRLRKANGL VKDVFEAKHM
QRLQGKTGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTVEL HELLLKRRRH
VNTTSDSEVL LNLLADELQQ CKNESLSSEE VFDAVAKVHS LTRGAYAVTA LIIGQGLVAF
RDPFGIRPLV LGKQETELGT EYMIASESVA LDAVGFELMR DVAPGEAVYI TLDGELYTQQ
CAHTPSYAPC LFEFVYFARP DSTIDKVSVY GSRVNMGAKL GEKIKREWED HDIDVVIPIP
ETSCDTALEI ARHLELPYRQ GFVKNRYIGR TFIMPGQQER KKSVRRKLNA IGVEFKGKNV
LLVDDSVVRG TTSEQIIEMA REAGAKKVYF ASAAPEIRFP NVYGIDMPTA SELIAHGRDV
DEISKMIGAD GMIFQDLEDL AEAVRMENPE IKRFETSVFD GNYITNDVDQ AYLDHITKLR
NDDAKANRSK DIGTNLELHN VCHP
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