| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2979 |
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| Symbol | |
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| ID | 6117294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3646083 |
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| End bp | 3650105 |
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| Gene Length | 4023 bp |
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| Protein Length | 1340 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634521 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001761345 |
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| Protein GI | 170727319 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.698765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTGA CGAAAGCCCA TCTAAGCTAC ACATCTAAGG CCTTACTTTT ACTTATGTTG
GTAAGCTTGG TCATCTGCAT CACGCTCTCA ATTTATAACC AAAGCAGCAA GCAACAGCTC
ATCGATAGCT ACAATCGTTT AAGTACGACT AATGAGTTGA TCCATAAGCT AAGGTTAAGC
ACAGATCAAC AAACAAAATT CGCTAAGCTT TATGTGTTAA CTGGAAATGA CCGATGGTAC
TCGCTTTTTG AACAGATTAT GGCGACACGT AATGGCACCG CAACCCTTCC AGAAGGCACC
TCTCTGACCT ACTGGGAAAA AATATTAGAC CCTGAGTTTG AACTCATTGA ATTAGAAAAT
ATTGCTTCTA ATGATAGCTT TCCCATCATA GACAAAATGA GCAAAATGGG CACACGTGAC
TACGAATTAA CTCAGCTTAG TCTTGCACTG CAAAAAGCCA ATGAGTTAGC TGCTGATGAG
CGCCGAGCCC TTAAACGTTT AATCGATAAC CCAAATGCCA GCTCCTATGT GATGACACAG
CTTTTAGGCG TTCAATATCT TAGCGATAGC TCTAAAGTCA TGACAACCAT AGGCCTTGCT
AGCCGAGCAT TGAACGAGCG AGCCCAAGAG GAGCTGACAC ACACGATAAA TAAAGGTTCT
GTTATCTTCT CCATGCAGAT CCTGAGTTTA ATAATATTTG TGAGCAGCAT CCTCTGTTTC
TTTGTATTGC AGTGGCGCCT TTATATCCAC CCTCTCAAAA ATATGCAAAA AACAGTAATA
AGCCACGTTG CAGACAATAA CTTTAACTTT GTGCTTGATG AAAAAACTAA AGGAGAGATG
GGCGAGTTTA ACAAAGCCTT AAATCATGTC CTTAGAAATG TTGCAGGACA GCTACAACGT
AACTCCCTTC TAAAAGACTT TAGTGTCGTT CTCAGAGGAA AGGAGAATAC AGAATCTTTA
GGTAAGGAGG TAAACCAGTT CTTAATCTCC AAACTAAACC TGCCTTTAAT CGGTATATAC
GTATTAGACG ATAATACGTT AGAACGAGTT GCTGGAATTG GCTATAGCGC CGATGCTCCC
TTGTCATACA CACATAATGA CTCAACCCAT AAAAGTATCC TGTACGGCCA AAAATATCGC
CGCTTTAAGA ACCTTAAGGA CAAGTATTCT ATTAGTCTAA ATGGCAGCAG TTTATCTCTA
GCTGAAATGC ACTACTTTCC CCTTGTCGTT AATCAGTCTC CAGTAGGCTT ATTAGAGATA
GGCACTCTAA CACCACTCGA TGACACGGTT GAACATTGGG TAAAAGATGT CATTGATGAT
TTAGCTATCG GGGTACAGCT AACTCGAAAC CTTGAGTTGC AAAAGAAAAC TGAGCTAAAG
GTCGTCGAAC AGCTAGAGCT AAACCGTCAG ATCTTAGATG CTATTCCTAA CCCTATGTAT
TACCGTAATG TTGATAGTGA ATATATTGGT GTTAATGAAA GCTTTACCTC ATTCTTTGGC
CTATTTGAAG CAGATATTAT CGGCTCGACT CCCAAAGATA TCTTTGAAGC TGAAACAGCT
CAACAGTTTG AGGATTCTGA GGCTAAGCTC CTCGAAAATA TTGGCTCATT AGATTACGAA
GCACGCCTAG TGAATGCTGA TGGTATTCAA AGAGATGTTA TGGTTTATGA AGCCACCTTC
TTCTCCACCA AAGGGGATCC AAATGGCGTG GTAGGTCTAC TCTTGGATGT CACCGAGCGT
AAACAGATGG AAGTTGAGCT GAGAAAAGCA AAAGAAGCAG CCGATGAAGT TAGTAAAGCT
AAAGGCGACT TCCTTGCCAA TATGAGTCAC GAGATCCGAA CCCCAATGAA TGCCATTATC
GGTATGTCCC ACCTAGCCCT AAATGCTGAC CTTAATCCCA AACAGAGAGG CTATGTCAGT
AAAATAGATA TGGCAGCTAA ATCCCTACTT GGGATCATCA ATGATATTTT AGACTTCTCT
AAAATGGAGG CTGGCAAGTT AGTCACAGAG GACGTTGACT TCAGGTTAGA TGAAGTACTT
GATAATTTGA CTAATATCAT CGCAGTCAAG GCCGAAGAGA AAGGGTTAGA ATTTCTATTT
GATATAGACC CCCATATTCC CCTCGCTTTA GTGGGTGATC CTCTACGTAT CGGTCAGGTA
TTGATCAACC TATGTGGTAA TGCCATTAAA TTTACCGACT CTGGAGAAGT GGTTGTCGGA
GTAAAACTGC TTAACAAGAG TGAAGATGGA CTGAATCTTC AATTCAATGT ACGTGATTCA
GGCATAGGCT TATCACAGGA GCAGCAAGAC AAGCTCTTTA AGTCCTTCTC TCAGGCAGAT
GCCTCGATTA CGCGTAAATA TGGCGGCACA GGATTGGGAC TGACCATCTC AAAACGCTTA
GTAGAGATTA TGGGAGGCAA AATCTGGGTT ACCAGCGATG AAGGACAAGG TTCAACTTTC
TCCTTCACCT TAAATTGTGG ATTACAAGAT GCAAAAATGA AGAACAACTT CATGCCTATT
GAAAACCTAA TAGGTAAACC TGTTCTGATT GTGGACGATA ATGATGTCGC AAGAGAGATA
CTTGTTAATC TATTAACCAT GATGAAGTTC TCTCCATCGG CCGTGAGCAA TGGTCAAGAA
GCAATTTCAG CAATAGAGTC CGAAAATATT AATCCTTATG AACTGATATT TATGGATTGG
AACATGCCAG GGATTAATGG GATAGAAGCG ATTAAGAAAA TAAAAGCGCT GAACTTAATC
AAACAACCAA AGATAATTTT AGTCACCGCC TATGGCCGTG AAGTTGGGAT GACAGAGGAT
ATTGAACATC TGCTCGATGG CATTATCATC AAGCCAGTCA ATCCCTCTAT CCTTTTTGAC
TCAGTTGTGG GTGCATACGG TATAGAGGGT CTAGGGGTAA AAGATAACAG CAAAAACTCT
AACTCAAATG AAATAGAGTT AGATTTAACA GGTAAATCTC TACTTCTGGT TGAGGATAAC
GAAACAAACC AAGAGGTAGC AATGGGGATG ATGGAGCCAT TTAATGTCGA TATCACAGTC
GCAAATAATG GTCAGGAAGC ACTAGATAAA TTAGAAGAAA AAGAGTTTCA ACTGGTATTG
ATGGATATGC AGATGCCAGT AATGGATGGC ATAACCGCAA CAATAAATAT CCGTAAGAAT
GATAAATACA ATGACCTTCC TATCGTTGCG ATGACCGCCA ATGCCATGGA AAGCGATGTC
CAAAACTGTA AACAAGCGGG CATGAATGAT CATATTGGTA AGCCCATTGA CTTTACAATT
CTCAAAGAGA AACTCAGAAA ATATATCCTA GATGCAGATG AGGAGCTGCC CCCCTCGCCT
CTTCCTGATC AACCTACTGA GGTAGAAGTT AAGGTAGAGA ATATAGAGCT TTCTGAGCCA
ACTAAAGAAG CTGAACTCAT CATAGAGGAG ATGCCAGGTG TCGATACAGT GTTAGGTATC
TCTCGGATCG GCGGTAATGA AACAAAGTAT TGGGAAATTT TAGAGCGATT TATTAACTCT
CAGATAGAAG CCATGATCAA TCTAAAACAA GCCATTATCA TTAAAGACAT CGAAACTGCC
ACTCGTACAG CCCACTCCCT GCGAGGAGCC GCATCAAACC TTGCAGCATT AACTCTCTGT
GATATGGCGA AGGAGATGGA GGACTCTCTC AATAATAATG TTTACCCAGA AGAGATAAAA
ATAGACATGG TTATCGAGCA CCTGCAAACA CTTAGCGCCT ATATAAAAGC TAAACCATCA
AAACAGGAAG GTGCAATGGT AGAGCAAGAT GAAGTTGAGC CCCTTAATGA CCAACTCCCA
TTAGATACCC TGCTCACTAT GATAGACAAT TATGACACTC AAGCACTAGA GGAGATACAG
AGAGTCAAAC AAACCCTAAT TAGTCACCAA GTCGATTACG GCGCAATAGA GAAAGCCATT
GAAAACTTTG ATTTTGATAA AGCTAAAGCG CTGACTGAAA AGTTAACGGG AACCAATAGC
TAG
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| Protein sequence | MPLTKAHLSY TSKALLLLML VSLVICITLS IYNQSSKQQL IDSYNRLSTT NELIHKLRLS
TDQQTKFAKL YVLTGNDRWY SLFEQIMATR NGTATLPEGT SLTYWEKILD PEFELIELEN
IASNDSFPII DKMSKMGTRD YELTQLSLAL QKANELAADE RRALKRLIDN PNASSYVMTQ
LLGVQYLSDS SKVMTTIGLA SRALNERAQE ELTHTINKGS VIFSMQILSL IIFVSSILCF
FVLQWRLYIH PLKNMQKTVI SHVADNNFNF VLDEKTKGEM GEFNKALNHV LRNVAGQLQR
NSLLKDFSVV LRGKENTESL GKEVNQFLIS KLNLPLIGIY VLDDNTLERV AGIGYSADAP
LSYTHNDSTH KSILYGQKYR RFKNLKDKYS ISLNGSSLSL AEMHYFPLVV NQSPVGLLEI
GTLTPLDDTV EHWVKDVIDD LAIGVQLTRN LELQKKTELK VVEQLELNRQ ILDAIPNPMY
YRNVDSEYIG VNESFTSFFG LFEADIIGST PKDIFEAETA QQFEDSEAKL LENIGSLDYE
ARLVNADGIQ RDVMVYEATF FSTKGDPNGV VGLLLDVTER KQMEVELRKA KEAADEVSKA
KGDFLANMSH EIRTPMNAII GMSHLALNAD LNPKQRGYVS KIDMAAKSLL GIINDILDFS
KMEAGKLVTE DVDFRLDEVL DNLTNIIAVK AEEKGLEFLF DIDPHIPLAL VGDPLRIGQV
LINLCGNAIK FTDSGEVVVG VKLLNKSEDG LNLQFNVRDS GIGLSQEQQD KLFKSFSQAD
ASITRKYGGT GLGLTISKRL VEIMGGKIWV TSDEGQGSTF SFTLNCGLQD AKMKNNFMPI
ENLIGKPVLI VDDNDVAREI LVNLLTMMKF SPSAVSNGQE AISAIESENI NPYELIFMDW
NMPGINGIEA IKKIKALNLI KQPKIILVTA YGREVGMTED IEHLLDGIII KPVNPSILFD
SVVGAYGIEG LGVKDNSKNS NSNEIELDLT GKSLLLVEDN ETNQEVAMGM MEPFNVDITV
ANNGQEALDK LEEKEFQLVL MDMQMPVMDG ITATINIRKN DKYNDLPIVA MTANAMESDV
QNCKQAGMND HIGKPIDFTI LKEKLRKYIL DADEELPPSP LPDQPTEVEV KVENIELSEP
TKEAELIIEE MPGVDTVLGI SRIGGNETKY WEILERFINS QIEAMINLKQ AIIIKDIETA
TRTAHSLRGA ASNLAALTLC DMAKEMEDSL NNNVYPEEIK IDMVIEHLQT LSAYIKAKPS
KQEGAMVEQD EVEPLNDQLP LDTLLTMIDN YDTQALEEIQ RVKQTLISHQ VDYGAIEKAI
ENFDFDKAKA LTEKLTGTNS
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