| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2971 |
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| Symbol | |
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| ID | 6117286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3637408 |
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| End bp | 3638400 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641634513 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001761337 |
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| Protein GI | 170727311 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.785867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGG CTAATCGTGA TCTCGAACTT AATGGTGCGA GAGATCTCAC CCTTGAAGAT
AAGCCGTATC TGGATGTACT TTCCGATGTA CTGCGTATGA TACGGTTATA CGCAAGCAGT
TATTATTGCG CCGAGTTCTC CTCTCCTTGG GGGATCGATG AGCCTCAGGC CGAATGCGGT
ACCTTTCATG TGGTGATCCG TGGTAGTGCT TGGTTGATGA CTGAGGAACT AACCAGCCCT
GTTTTTTTGT CGACCGGTGA TATTATTGCG TTTCCCACAG GCTCCCCCCA TCAAATTAGT
GAGCAGCCTG GTAGCCAGCT CATGTCGGGA GGCGAAGTGC TAGAGAAGAT AAGGTCGAAC
AGCAGTCCAT TTTCTGATGG ACAGAGTGTA GTGACACTCT TGTGCGGCTA CTTTCAGTAT
CAAACCGATA TCAGTTTGCC TCTATTGCGT GATATGCCGT CTATGTTACA TATCAAAACG
GAGGAGGAGC CTGAACTTGC TTGGCTCAAT CACCTAATCA AAACCCTTGC CTACGAATCT
CGCTCACTCC AGCCTGGTAA TGCCGTGGTC GTTGATCGCC TCACAGAAGT ATTGGTGATC
CAGCTACTGC GTTGGCATAT GAGGCATCAG CGAAATACAC CTGGTTACTT CCAGGCCTTA
GGCGATGACA AGCTCAGTCG TGCATTGATC CTGATCCATC AAGAGCCAAG TAAAGCTTGG
ACGGTAGAGT CCTTAGGCCG TGCAGTCTCT ATGTCGCGCA CCTCATTTGC TAATCGCTTT
CAATCTATCG TTGGCATGAC ACCACTGGCT TATCTGAGTC AGTGGCGCAT GCATATTGCC
TATGGACTGC TTGTTGAGGG GGAACTCTCT ATGCTTAGTA TTGCCGAACA GGTGGGCTAT
AAATCTGAAG CGTCATTTGG AAAAGCCTTT AAGAAAATCG TGGGCATAAG CCCAGGTAAA
GTCGCTAAGG GAGAAACACA GCCTGAGTCC TAG
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| Protein sequence | MNMANRDLEL NGARDLTLED KPYLDVLSDV LRMIRLYASS YYCAEFSSPW GIDEPQAECG
TFHVVIRGSA WLMTEELTSP VFLSTGDIIA FPTGSPHQIS EQPGSQLMSG GEVLEKIRSN
SSPFSDGQSV VTLLCGYFQY QTDISLPLLR DMPSMLHIKT EEEPELAWLN HLIKTLAYES
RSLQPGNAVV VDRLTEVLVI QLLRWHMRHQ RNTPGYFQAL GDDKLSRALI LIHQEPSKAW
TVESLGRAVS MSRTSFANRF QSIVGMTPLA YLSQWRMHIA YGLLVEGELS MLSIAEQVGY
KSEASFGKAF KKIVGISPGK VAKGETQPES
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