Gene Swoo_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2967 
Symbol 
ID6117282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3634033 
End bp3634974 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content44% 
IMG OID641634509 
Productalcohol dehydrogenase 
Protein accessionYP_001761333 
Protein GI170727307 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCAT TAATGAAAGC AGTACAGATC AATGAGTTTG GTGACCACAG CGTACTCCTG 
CTGAATGATG TTGTCATACC CACACCTAAT GAAAATGAAG TCTTGATTAA AGTAAAATCC
GCAGCTGTGA ACCCTGTGGA TTGGAAGATT CGTGAGGGTT ATTTACAGCC ACTGCTAAAC
CATTCATTAC CATTAACCTT AGGTTGGGAC GTATCGGGTG AAGTTGTTGC CATTGGTAAA
AATGTAACTA ATCTCAAAGT CGGAGATGCG GTATACAGCC GTCCTGATAT CGCCAAAAAT
GGCAGCTATG CCGAATATCA AACAGTCGTA GCCGAAGAAG CAGCACTTAA ACCTAGCTCA
TTCACTTGGC AAGAAGCAGC AGGTGTCCCT TTGGCTGCAT TGACTGCTTG GCAATCACTC
TATGGACTCG CAAAATTAGA ATCTGGTGAT CGGGTACTAA TACACGCAGG TTCTGGGGCT
GTTGGGCAAT TTGCAATTCA ATTGGCCAAA CTGCGTGGTG CATATGTTTA CACAACGACA
TCATCCAAAA ATACCGAACT GGTAATGGGC TTAGGCGCAG ATCAATCCAT TGATTATCAT
CAGGACGACT TCTCGCAATT AAAAGATATT GATGTAGTAT TTGATACCAT TGGTGGCGAA
ACCCAAGCTA AAAGCTGGAA AACATTGAAG AAAGGCGGAC GCTTAGTGTC TATTACTGAA
ACGCCAGATG ACGCAATTGC GGCTAAATAT GATATCTCAG CATTTTTTTG CTTTGTACAG
CCCAATGGTG AACAGCTTAA AAAGCTGGCT GAACTTGCCG ATGCTGGTCA GCTGACAGTC
ACTATCGACA GTGAATTCTC CTTGAGCCAA GTTGCAGAAG CTCACAAGCG TAGCGAGACT
GGCCGCGCAC AAGGGAAAAT CATCATTAAC GTTTCAGCAT AA
 
Protein sequence
MSPLMKAVQI NEFGDHSVLL LNDVVIPTPN ENEVLIKVKS AAVNPVDWKI REGYLQPLLN 
HSLPLTLGWD VSGEVVAIGK NVTNLKVGDA VYSRPDIAKN GSYAEYQTVV AEEAALKPSS
FTWQEAAGVP LAALTAWQSL YGLAKLESGD RVLIHAGSGA VGQFAIQLAK LRGAYVYTTT
SSKNTELVMG LGADQSIDYH QDDFSQLKDI DVVFDTIGGE TQAKSWKTLK KGGRLVSITE
TPDDAIAAKY DISAFFCFVQ PNGEQLKKLA ELADAGQLTV TIDSEFSLSQ VAEAHKRSET
GRAQGKIIIN VSA