| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2959 |
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| Symbol | |
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| ID | 6117274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3626284 |
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| End bp | 3629097 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641634503 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001761327 |
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| Protein GI | 170727301 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.789708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAA GAAAATTGCT TCCTATTAGG GGAAGTCATG TAAAAAGAAT AGGCGAACAA
GATCCAAATA GAACAGGGAT CATTGTGGAT AATTACCCAG AAACATCATC GGTAAAAGTA
CATTGGGTTC ATGATAAGAC AGAGTCTGTT CAAACTGTCG ATGCTCTAGT AAATGGATTT
AGGTTAGGTA CTGGTGTTAT CGCTCCCACC ACTTCAGATG GCAGGAAGTT AGGCGAAGGC
CAACTGACCC AATACCGAAA GATTGCTGGA CAAGAACTTT TACTCGTTGA GTTTCATGAA
AGCAATGAAA AACGCTGGCT CCCTTACCAA TTATTAAGCC AGGCAAAAGA CGTAAAACAC
GAATTAGTCA CCTTAAAACA CTCTGCTGCA GAGAAAGTAA GGTTAAAGAC GTTAGCTCAC
GCCATTACTA TTTGGAATGA AAATACTGGT GCGCTTTCAA ATTTAAATAT CGATCCACTG
CCCCACCAAA TTCACCTCGT TCATCATATT CTAAATTCTG GCAATTTAAA TTGGCTAATC
GCTGACGATG TTGGTCTTGG TAAAACAGTT GAAACCATCT TATTAATGAG TGCATTGCAG
CACCGAAAAC AACTAAAAAG TGTTTTACTC ATTACCCCAG CTGGACTAAC TCAACAGTGG
CAAGAGGAAA TTATTGAAAA GGCGCCTAAC TTACCGCGCT TTAATGTTTA TGGCACAGAT
TTTCCGACCA AACATGAACA CCATTGGTTT AAAAATGACT TTGTTGTTGC ATCTATGGAC
CGTTTGAAAA ACAAAGACCA CCTAAATATT TTACTTGATA GTCGTCAATA TGACTTAATC
ATTGTCGATG AAGCGCATCG CCTATCTCGA CGCCAATATG GCTACAAACT CGATAGCTCG
GAAAGGTTTG AATTAGTTGC CGAGTTACGT AAACAAAATC AAAATGGCAA TTTAATCCTC
CTTACTGCGA CCCCACATCA AGGTATGCAA GACAAGTTTA TTGCGCTCCT TGAGCTACTT
AGACCTGAAC GAAAGAGTGA TCTTTTAAAA ATAGATGTTA ACCCTGAAGT TTTGAGTGAA
TTTGTATTTC GTAACTATAA GGCCGACGTA ACGGATCTTG ATGGTAACTT TGTATTCCAC
GGTAAAACCA CTCGGTCAGT TCAAGTTCAA ACGAATGAGC AGGCAATTGA ATTTGATAGC
TCACTAAGAA AATATCTAAA GCGCGGGTAC TCTGCTTCCA AGGCTCTTGG GAGAGAAGGA
AATGCTATTG GCTTTGTTAT GACTGTGTAT CGTAAGCTTG CTGCTTCAAG TGTGGCAGCA
ATCCATAAAG CACTACTTAA CCGCTTAGAT CGACTCCAAA ACCAACTATC CTCATTGGAT
TCTGTTGATA TTGATGAAGA TAGCCCTTTT CAAGGTGAAC AAGAGGAGTC ATTGGCACAA
AAATCTTCTG AAAAAGAATT TTTTAGTGGT GAAATTGGCT TACTAAAAGA GTTGATTATT
GATGCAACTA ACTTACTTGA GCATGACAAT AAGTCTAAAC AGTTTATCGA TACTATTATC
ACAAAAATCT TAAAGAATAA TCCGAAGGAA AAGGTACTAA TATTTACAGA GTATCGCTCT
ACACAACAAT ATTTAGCTAA AACCCTACAA CAGAAAATAG GCGCTGATAG CGTCAATTTA
ATTTATGGTG GAATGAAGCT AGATGAACGA AAACAACAAA TTTATGACTT TGAAAATACA
GGTCAATTCT TAATATCAAC AGAAGCTGGC GGTGAAGGTA TTAACCTACA AGAGCATTGC
CATATCATGA TCAACTATGA CTTACCATGG AACCCTATGA GGTTGGTTCA AAGAGTTGGC
CGTCTATATC GCTACGGACA ACTGAAGCGA GTTGTAGTAT TTAATATTAA CTCGTCAGAC
TCATTGGATG AAAAAGTACT CGAAACTATG TATGGGCGTG TTGAGGCGGT AGTAAAAGAC
TTAGCTCAAG TTCAGTCTTC AGAGTTTAAC GATGCACTAA TGGATGACAT TTTAGGCGAA
GTATCTAGCT TAATTGATAT CGAATCTATT CTAGAAAACG CCCAATCAGA AGCCATTGAA
CGAACAAACC AAAGGATCAA TGAAGCGGTA GAAAAAGCCA AAGAGTCGGC CGAACTTCAG
CGTGATCTTT TCCAACATGC GATCAATTCA AATGATGTCC GCAATGACAA CCCGATAAAT
ATTAACAAAC AACATGTTGC TGCTTTCATA TCTGGGATCT GTGAATTACT TGATATTGAA
ATTATGAGTA AGCTACACAA CGATGAAGTA TGGCAATTAA GAATACCGCC CAATGTGATG
GAACTGCTAC AAACGAAAAG AAGCAGACAC GATATTAGCT TTGATAGAAA AATTGCGTCA
ACCAGAGCTA ATACCCAATA TATTGATGTT GACTCTTATT TGATGAAGTT ATTTTTATCA
CACGCTATGA ATTATAACTT TAAAGGCAAA GCTGCGCACT TACACGCAGA ACAACTTGCT
GCAAGCGCAT TTATGGCGTG TATCTTAACC TGGCAAAACA GTGTGGGAAT TAGAAAGCGG
CAAGATTTTA CGATTTTGAG TATGGAAAAT GGGGAAATCG TAGAGAATAC GGAGGAAATA
TTAAACTGGT TACTTCTCCC CGCGAATGAC GCAGAAAATA AGCCACACTC TATTGATAAG
AGACGACTTT TTCAATTAAC CCAAGCTTTT GCTGAAAAAA AATTAGCGGT TAACATTAAC
CTGCATACTT TTCCAGAGAA AGTGCACTGG GTAAGCGCTG CAGTAATCAA TTAG
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| Protein sequence | MQRRKLLPIR GSHVKRIGEQ DPNRTGIIVD NYPETSSVKV HWVHDKTESV QTVDALVNGF
RLGTGVIAPT TSDGRKLGEG QLTQYRKIAG QELLLVEFHE SNEKRWLPYQ LLSQAKDVKH
ELVTLKHSAA EKVRLKTLAH AITIWNENTG ALSNLNIDPL PHQIHLVHHI LNSGNLNWLI
ADDVGLGKTV ETILLMSALQ HRKQLKSVLL ITPAGLTQQW QEEIIEKAPN LPRFNVYGTD
FPTKHEHHWF KNDFVVASMD RLKNKDHLNI LLDSRQYDLI IVDEAHRLSR RQYGYKLDSS
ERFELVAELR KQNQNGNLIL LTATPHQGMQ DKFIALLELL RPERKSDLLK IDVNPEVLSE
FVFRNYKADV TDLDGNFVFH GKTTRSVQVQ TNEQAIEFDS SLRKYLKRGY SASKALGREG
NAIGFVMTVY RKLAASSVAA IHKALLNRLD RLQNQLSSLD SVDIDEDSPF QGEQEESLAQ
KSSEKEFFSG EIGLLKELII DATNLLEHDN KSKQFIDTII TKILKNNPKE KVLIFTEYRS
TQQYLAKTLQ QKIGADSVNL IYGGMKLDER KQQIYDFENT GQFLISTEAG GEGINLQEHC
HIMINYDLPW NPMRLVQRVG RLYRYGQLKR VVVFNINSSD SLDEKVLETM YGRVEAVVKD
LAQVQSSEFN DALMDDILGE VSSLIDIESI LENAQSEAIE RTNQRINEAV EKAKESAELQ
RDLFQHAINS NDVRNDNPIN INKQHVAAFI SGICELLDIE IMSKLHNDEV WQLRIPPNVM
ELLQTKRSRH DISFDRKIAS TRANTQYIDV DSYLMKLFLS HAMNYNFKGK AAHLHAEQLA
ASAFMACILT WQNSVGIRKR QDFTILSMEN GEIVENTEEI LNWLLLPAND AENKPHSIDK
RRLFQLTQAF AEKKLAVNIN LHTFPEKVHW VSAAVIN
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