| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2958 |
|---|
| Symbol | |
|---|
| ID | 6117273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3624897 |
|---|
| End bp | 3625874 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641634502 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001761326 |
|---|
| Protein GI | 170727300 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGTC CCAGAAGAAC CCAGATCAGT CTTGAAGACA CGCCTTGGTA CCATTGCTGC
TCCAGAGTGA CTAGACGTGC CATGCTGCTG GGGGATGATA AATTCACAGG TAAAAACTAT
GACCACAGGC GTGATTGGGT CGAATCCCAG TTACTGAAAT TAGCGGGTGT GTTTGCAATT
GATGTTGCTG CATATGCCGT GATGAGCAAT CATCTACATG TTGTGCTTTA TATTGACATT
GAAACAGTGA ATAGATGGTC AGATAGAACG GTAGTTGAGC AGTGGCATAA GCTGTTTAAT
GGTACTGAAA TCACACAAAA GTTTGCTAAG GGTGAAGTGA TAGAAGAGCA GCAAGTGGCT
AAATTAAAAC ACCTTATTGC CACTTACCGC TCACGCTTGT GCGATATTAG TTGGTTTATG
CGATGTCTTA ATGAGCCGAT AGCCAGAAAA GCCAATATCG AAGATAATTG CACAGGTCAT
TTCTGGGAAG GTCGCTTTAA AAGCCAAGCC CTGCTTGATG AAGCCGCTGT ACTAGCTTGC
ATGGCTTATG TCGAACTCAA TCCGATTAGA GCCAAAATAG TTGATACACT TGAGAATTCA
GACCACACGA GTATACAACT TAGGGTTAAT GCTGCGTTGA AAGGTGAGCA ACCCACTCAA
TTACTCCCCT TTATTGGAGA TGAGCGGCTC AATCAGCCCA AGGGAATAAA CTTCACACTG
AAGGATTACC TAGAGTTAGT TGATGAAACG GGTAGAGTTA TCCGTGATGA TAAGCGCGGC
TCAATATCTA AAAATTGCAC AAAGATACTG ACAAGATTGA ATATTTCATC AGACAACTGG
ATAAAATTGA CCTCAGAGTT TGGCAAACTG TTTCACGGCC CTGTAGGAGA AACACAATCG
TTAACACGCT ATTGTGAGCA TCTTCAAAAA CGTCGACGGC ATTTCTCAAA AAGCTGTCAG
CACTTTCAAG CTGATTAA
|
|---|
| Protein sequence | MPRPRRTQIS LEDTPWYHCC SRVTRRAMLL GDDKFTGKNY DHRRDWVESQ LLKLAGVFAI
DVAAYAVMSN HLHVVLYIDI ETVNRWSDRT VVEQWHKLFN GTEITQKFAK GEVIEEQQVA
KLKHLIATYR SRLCDISWFM RCLNEPIARK ANIEDNCTGH FWEGRFKSQA LLDEAAVLAC
MAYVELNPIR AKIVDTLENS DHTSIQLRVN AALKGEQPTQ LLPFIGDERL NQPKGINFTL
KDYLELVDET GRVIRDDKRG SISKNCTKIL TRLNISSDNW IKLTSEFGKL FHGPVGETQS
LTRYCEHLQK RRRHFSKSCQ HFQAD
|
|---|
| |