Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2943 |
Symbol | |
ID | 6117258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3603931 |
End bp | 3605949 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641634487 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001761311 |
Protein GI | 170727285 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0688199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC CATACCCACA TTTAATGGCC CCGCTTGATC TCGGGTTTCG CACCATAAAA AATCGTAGCT TGATGGGCTC GATGCACACA AACCTAGAGG AAGCGCCCGG CGGCTTCGAG CGTATGGCGG CTTATTACGC GCAGCGCGCC GCAGGTGGAA TAGGCATTAT CGTGACAGGT GGTTTTGCCC CTAACATTGA AGGTGGCGGT ATGCCTAATG CCACCATGAT TGCCACTGAT GAAGATATCG AAAAGCACAA GATTATCACT CAAGCGGTTC ATAAAGAGGG AGGCGCTATC TGCCTGCAGA TCTTACATAC CGGCCGCTAC GCTTATCATC CACACCTAGT GAGCTGCTCA CCACTTCAAG CCCCCATCAA CCAGTTTGTC CCCAAAGAAC TTGATGAAGC TGGGATTGAA AAACAGATCC AAGATTTCGT CAACTGCGCG CTTAACTCAC AAGCGGCGGG ATATGACGGT GTGGAGATCA TGGGATCTGA GGGTTATTTC ATTAACCAAT TTATCTGTAA GCGCACCAAC CACAGAAACG ATCGTTGGGG TGGCAGTTAC CAAAACCGAA TTCGACTCGC CCTTGAGATA GTTCGCCGCA CCCGAGAAGC GGTCGGCAAA GAATTTATCA TTATTTACCG CCTATCTATG CTGGATTTAG TCGAAGATGG CAGCACTTGG CAGGAGGTTG TTGAGCTTGC TAAAGGTATT GAAGCAGTGG GCGCCACCAT TATCAATACT GGCATTGGCT GGCATGAAGC TAGGGTTCCC ACCATCGCCA CCAGTGTGCC GCGCGGCGCC TTTGTTGAGG TCACCAAACG GATGAAGCAG GAGGTGAGCA TCCCTCTATG CACCACAAAC CGTATCAATA CCCCAGAGCT TGCTGAAGAT ATTCTTGCCC AGGGCAATGC CGATATCATC TCCATGGCCA GACCTATGTT GGCCGACCCC GACTTTATTA ACAAAGCGGC GGCAGGAAAA GCCGATGAGA TCAACACCTG CATAGGCTGT AATCAAGCCT GCTTAGATCA TATCTTCCAG ATGAAGCTGG TTTCATGTTT AGTTAACCCA CAAGCTTGTC ATGAGACTAA GCTTATTATC CTGCCAGCGA GTGAAGCTAA AAATATTGCC GTCGTTGGCG CAGGACCTGC TGGACTTGCA GCAGCGACAA CGGCAGCTAA ACGCGGCCAT AAAGTCACCC TATTTGAAGC AGACGATAAA GTGGGTGGCC AGTTTAATAT CGCCAGACAG GTACCGGGTA AGGAGGAGTT CTCTGAAACC ATTCGCTACT TTAGTAAGCA GATTGAACTA ACGGGCGTAA CACTTAAGCT CAACACAAAA GCGACAAAAG AGGATTTGAG TCATTTCGAC GAAGTCCTAC TTGCAACTGG CATCACTCCA AGACAGCTCA ACATTCCTGG CATTGATAAC CCTAAGGTGA TGACCTACAT CGATGTACTT AAACATAAGA AGCCTGTCGG TAAACGTGTC GCCATTATTG GTGCAGGCGG TATTGGTTTC GATGTGGGTG AATACCTTTC CCATCAGGGA CCATCCACTA GCTTAGATAA GGACGCCTAT ATGAAAGAGT GGGGAGTCGA TCTCAACGTC TCAACTCCAG GTGGTCTAAC CCAGCCCCAA AGTGAACCTT CGCCGCGCCA GGTATTCCTG CTACAGCGTA AAACGTCTAA AGTTGGAGCT GGATTAGGTA AAAGTACCGG TTGGATCCAC CGTACAGTAT TGAAAAATAA GGGCGTTAAG ATGCTTAAAG GCGTGCAGTA CACTCAAATT GATGAGCAAG GTCTGCACAT TGAGGTAGAG GGCAAAGCCC AGTTACTTGA AGTAGACAAT ATCATCATCT GCGCAGGTCA GGACTCCCAC AGAGCGCTGC AAGCGGGATT GGAAGCTGAC AATGTCAAGG TCACCTTAAT CGGTGGTGCT GATATCGCAT CCGAACTTGA TGCTAAACGT GCAATCAAAC AAGGTACTAT CGTCGCAGCA GCGCTATAA
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Protein sequence | MSNPYPHLMA PLDLGFRTIK NRSLMGSMHT NLEEAPGGFE RMAAYYAQRA AGGIGIIVTG GFAPNIEGGG MPNATMIATD EDIEKHKIIT QAVHKEGGAI CLQILHTGRY AYHPHLVSCS PLQAPINQFV PKELDEAGIE KQIQDFVNCA LNSQAAGYDG VEIMGSEGYF INQFICKRTN HRNDRWGGSY QNRIRLALEI VRRTREAVGK EFIIIYRLSM LDLVEDGSTW QEVVELAKGI EAVGATIINT GIGWHEARVP TIATSVPRGA FVEVTKRMKQ EVSIPLCTTN RINTPELAED ILAQGNADII SMARPMLADP DFINKAAAGK ADEINTCIGC NQACLDHIFQ MKLVSCLVNP QACHETKLII LPASEAKNIA VVGAGPAGLA AATTAAKRGH KVTLFEADDK VGGQFNIARQ VPGKEEFSET IRYFSKQIEL TGVTLKLNTK ATKEDLSHFD EVLLATGITP RQLNIPGIDN PKVMTYIDVL KHKKPVGKRV AIIGAGGIGF DVGEYLSHQG PSTSLDKDAY MKEWGVDLNV STPGGLTQPQ SEPSPRQVFL LQRKTSKVGA GLGKSTGWIH RTVLKNKGVK MLKGVQYTQI DEQGLHIEVE GKAQLLEVDN IIICAGQDSH RALQAGLEAD NVKVTLIGGA DIASELDAKR AIKQGTIVAA AL
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