Gene Swoo_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2938 
Symbol 
ID6117253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3596381 
End bp3597625 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content36% 
IMG OID641634482 
Producthypothetical protein 
Protein accessionYP_001761306 
Protein GI170727280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.237054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGTG TTAAAAAGAC AATGCTATTA ATCAGTTTGT TTATTATGCC TTTGTCAGCT 
TTTGCTCATT TTGGCGAAGC AATTACTCGC AATATCATTG TTGAGCCAAT AAATAATAAT
GATTTAATTA TTATACATAT TCGAACTCCA GCACCTTTAA TATTACTTCC TTCTAACTGG
GCTGGTATTG ATAAACAGCA ACCTATTCCT TTTACAAAAA TAGAAAAGAA TGGAACAAAG
GCTTTATATT ATTTATATGA AGTGGATATA CGTGAGCAGC TTCCACAATT TAAAAAAATC
ATCATGAAAG AATTTTATTT AAAGACTGCT GAAGGAAGGA GGCTTGAATA TAAAGTTGGT
AAAATAAAAA TTCATAACTT TCATGACCGA CCTGTATTCA ACAACCTAGA TAATGCCTAT
CTAGCCATGT CTGGAGAGAT GTTTCCACAT AATCCACTTG AGCTGTTTGA TGCTGTGATT
GATTTTTCGG TGACCTTTAG TGGTGCAGAT TTTTCAGAGG ATATCTTTTT GGTGAGTACC
GCTGGGGAAA AGTTCAAGGC TACCGACTGG CTAGTTAACG TGATCACATA CCCAAAGTCG
GTGAACATCG GTGTTAAAAC AATACCTGGT ACATTGAGTG AGGGGGTTTT ACTGAATCAT
TCAAGCTCTT CATTCATCGA TTTTTTTACG ATGGGAATAG AACATATTTT CACTGGCTTG
GACCATATGT TGTTTATTGT ATTGATGACA TTATCCTGTT CAACAATGAT GCTTTTTTTT
AAAAATGTAA CAGGTTTTAC CTTAGGCCAT ATGATCACAC TGACTCTGGG AGCGACAATT
AGCACTTTAG AGGGAACCTG GTTTATCCCT ATGATTGAAC TGGCAATAGC AATGACGATT
CTGTATATGG CTACCATTAA TTTAGTTAAG CGCAGTGATG TCGGCCATTG GTTTGTGTCA
TTTTTCATTG GTTTAATTCA TGGTTTTGGC TTCTCTTTTT TGATGAATAA AGTTTTTGTT
CAAAACCAAG GTTTCGATCT GCACTCTTTG TTAGGTTTTA ACTTAGGTAT TGAGGCTGGA
CAGGTATTAC TCTATGGGGG ACTTATTTTG ATATTTGCAC TCATTGAATG GCTAGAGTTT
CGGTGGCTAA AACAGTGGCG AAAAGGAGTC GCGGTGATCA GTATCATGAT CTCCTTAGTC
TGGATATACC AAAGGGCAAT GGTGTTAATT CCTACTCTAG TATGA
 
Protein sequence
MLSVKKTMLL ISLFIMPLSA FAHFGEAITR NIIVEPINNN DLIIIHIRTP APLILLPSNW 
AGIDKQQPIP FTKIEKNGTK ALYYLYEVDI REQLPQFKKI IMKEFYLKTA EGRRLEYKVG
KIKIHNFHDR PVFNNLDNAY LAMSGEMFPH NPLELFDAVI DFSVTFSGAD FSEDIFLVST
AGEKFKATDW LVNVITYPKS VNIGVKTIPG TLSEGVLLNH SSSSFIDFFT MGIEHIFTGL
DHMLFIVLMT LSCSTMMLFF KNVTGFTLGH MITLTLGATI STLEGTWFIP MIELAIAMTI
LYMATINLVK RSDVGHWFVS FFIGLIHGFG FSFLMNKVFV QNQGFDLHSL LGFNLGIEAG
QVLLYGGLIL IFALIEWLEF RWLKQWRKGV AVISIMISLV WIYQRAMVLI PTLV