| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2932 |
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| Symbol | |
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| ID | 6117247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3589921 |
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| End bp | 3590934 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634476 |
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| Product | transketolase central region |
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| Protein accession | YP_001761300 |
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| Protein GI | 170727274 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.911971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAA CGAATAAATT AACCATTGCA CGCGCAATGG CAGAATCCCT AGCTCAGGAG
ATGAGAACCG ACCCTAATGT CTTCATCATG GGGGAAGATA TTGCCCAACT CGGCGGTGTC
TTTGGTAATA CACGAGGGCT GTATACTGAG TTTGGAGAAG AGCGCATCCG TGACACGCCC
ATTTCAGAAA CGGCCTTTAT TGGCGCCGGT GTGGGCGCAG CAATGGACGG CATGCGTCCT
GTCGTCGAAT TAATGTTTGT GGATTTTTTT GGCGTCTGCT TTGACGCCAT ATATAACTTA
ATGGCGAAGA ATATCTACTT CTCTGGCGGC CACTCAAACG TTCCTATGGT GATCATGGCT
TCTACTGGCG GTGGTTACTC TGATGGCGGC CAGCACTCCC AATGTCTTTA CGCTACCTTT
GCACACCTAC CGGGGATGAA AGTCATCGCC CCCAGTAATG CCTATGATGC TAAAGGGCTT
TTAACCGCAG CAATACGCGA CAATAGCCCG GTTATCTATC TGTTCCACAA AGGCCTACAA
GGCATGGGTT GGTTAGGCAC AGAGCCTGCT GCCATTAACC AAGTACCAGA AGAAAACTAT
CAGTTAGAAA TTGGCAAAGC TAAAACTGTC ATCTCTGGTA CTGATATCAC CATTGTAAGT
ATTGGTATGG GGGTTCATCA CGCGTTAAAA GCCGCACATG AATTACAAAA AGATGATATC
AGTATCGAGG TCATCGATCT GTGCTCATTG GTCCCATTAG ATCGCCAACA TATTATCGAG
TCGGTAAACA AAACGGGCAG GCTGATTGTC GTCGATGAGG ATTACCACAG TTATGGCATG
AGTGGCGAGA TTTTCGCGTC TGTCATTGAA CATGACCACA CCATTTTCAA AACCCCGCCT
CAACGAATCA CATACCCAGA TATCCCTATT CCATTTAGTC GACCAATGGA GCAATGGGCC
CTGCCCTCAA CCGAAAAGAT TATTCACGCT TGTTTAACGA TGAAGGAGAA ATAA
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| Protein sequence | MSATNKLTIA RAMAESLAQE MRTDPNVFIM GEDIAQLGGV FGNTRGLYTE FGEERIRDTP
ISETAFIGAG VGAAMDGMRP VVELMFVDFF GVCFDAIYNL MAKNIYFSGG HSNVPMVIMA
STGGGYSDGG QHSQCLYATF AHLPGMKVIA PSNAYDAKGL LTAAIRDNSP VIYLFHKGLQ
GMGWLGTEPA AINQVPEENY QLEIGKAKTV ISGTDITIVS IGMGVHHALK AAHELQKDDI
SIEVIDLCSL VPLDRQHIIE SVNKTGRLIV VDEDYHSYGM SGEIFASVIE HDHTIFKTPP
QRITYPDIPI PFSRPMEQWA LPSTEKIIHA CLTMKEK
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