| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2924 |
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| Symbol | |
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| ID | 6117239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3580905 |
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| End bp | 3583532 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634468 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001761292 |
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| Protein GI | 170727266 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.409448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT CATCTCTGCG CTATCTACTC CCTGTGTTGT TACTCCCTGT AACAACTCAA
ATCACTTATG CCAATCAAGC AGGCTCTGAA CATAGCGATG CTGACACGCT TGAGAAGATT
CAGATCCGCG GGATCCGAGG CAGTGTGATC AAGTCAATCA ACACCAAACG CACCAGTGTC
TCAGTGGTCG ATGCCATCAC GGCAGAAGAT ATTGGTAAGT TCCCCGACAA GAACGTAGCC
GAATCTTTGC AGCGTATTAC AGGTGTCTCA CTGACACGAG TTCAGGGAGA GGGGGAAAGA
GTCGGTGTTA GAGGAACTGC GCCTAGCCAG AACCAAACCT ACATCAATGG CCAGAATATC
GCATCGGCAG ATTGGTGGAT CTCCTCCCAG CCTAACCGAG GGTTTAACTA CACTATGTTG
CCCTCGGAGA TTGTCAGCTC ACTTGAGGTG AATAAAGCCC CCGAAGCTGA TCATGATGAA
GGCTCCTTAG GTGGCTCCAT TAATATCAAA ACTCGCAAAC CGCTGGAAAC AGAAAACCAT
ATGTTTGTGG GTACGGCTCA GATGCAATAC AGCGAAAGCT CTGAAGAGCT CGATCCTCAG
CTATCACTGC TCTATAACTG GATTAATGAG GATGATAACT TCGGTGCACT TATCTCACTC
ATTCGCCATG AGAGACACCT AAGGCGCGAT GGGCTCGAAT CTTGGGGCTG GGCAGAGCGC
AACTTTAATA TAGATCAACA AGGCCGTTTA TCTCAAACCC AACAAGAGAG CGCCGATCTA
CAAGATATTT GGAGCCCTGG AGGCGGCGGA AGCGCGTTAT TTGAACAACA CAGAGTACGC
TCAAGTGCCA TGTTATCTCT TCAATATCAG CCAGATCTGG ACTGGAATAT CGAATTTGAA
ACCCTCTACT CTCAACTCGA CGCCAACAAC AGCAATCAGA ACTTCCTTTG GCAGCCCAGT
ACGGTTTACG GCAGAGGTGG AAAGATTAGT GACTACCAGA TCCAAGATAA CACTTTAACC
TCAGCCACCT ACAGCCAAGT TCCCACAGAT AACCCCAGTG GCATCCCCTT CAGCACAGCG
ATGGAAGCGA TTTGGCGCGA ATCAAAAATC GACACTAGCA TCTATCACCT ACTCGTTGAG
CATGAGTTCG ATTACTGGAA AAGCCAATAT CAGATTGGCT ATACCCGTGC CAGTGGTGGC
ACCAGTGGTG ACTTCACCTC TCAGTGGTCA GCCAATACTG ATTTTACCGT TAACACTCAA
ACAGCAAGAG ATATTCAAAC TCAATATACC ACCTCACCAC TACAGGGGGA TGCTTGGGCC
ATCAGTGAAG TGAGGCAAGA CTCACACAAC TCAGTTGATG ATGAGCTGTT TGCTCAGATA
GATTTTGAGC ATCAACTCGA CAGAGAGTTT ATCGACTCCA TAAAATTTGG TGTTAAATAC
AAGCGTCATA CTCGGGACTT TATTCGTTAC CGCTCCCGCA ATGGTGGCTA TCAAGGCCTT
GCTGGCGACT TAGGTTGGAC ACTTGCAGAC TTTCCCGCCA ACTTCCCCGA TAACTACCTA
GAGGGAGTAG GCTCACTAAA TACGCTAAAA CGCTATGCTT ATGCAGATAC AGGGGCGTTA
AACTCAGCTT ATAACGACCT CAACTTTATC CGCACAGAGG AGAAACCAAG TAGCTTCGAT
ATCAAGGAAA ACAGCTACGC TGGCTACACT AAGGTTAATT TTTCAGGTGA TAGCTACCGA
GGTAACTTAG GTGTGCGTGT GGTTCATACC CAGCAAACGG CCTCAGCCTA CCAACAAGTT
CCCTCCGATG ATGCTGATAA TCTGGAGTAT CTCTGGAGCA CTTCAGATAA AAGCTATACA
GATATTCTCC CTAGCATCAA TATCGCCATG GACTGGCGAG AAGATCTCGT CTTTAGGGTC
GCTGCATCGA AAGTGATGTC GAGGCCTGAG TACCACCATT TAATGCCATC GACTAACTAT
AATGTGACTC AAGCTCAAGG CGCAGGCGGA AACCCAGATC TGGATCCCTT CAGAGCCACC
AAGTTTGATA TCGCTCTTGA GTGGTATTTC GATGAAGCAG CCCTACTCTC AATTGCCCTC
TTCCACAAAG ATGTCAAATC CTTCATCGAT ATCAAACGTT ATGAGGAGGA GTATGAAAAT
ATTGAGATGA TCATCAACCG TCCCATCAAT GGTAGCGGTG GCACCATTAG AGGCGCCGAG
CTCAGCTGGC AGCAGGAGAT CATCTATGGA GTCGGCATTA TCGCTAACTA CACCTACATC
GATGGGGAGC GTAAAGATTC TGAAACCGGC GAACATATCA AGATCCCCGG CCACTCAGAT
CATAGTGCTA ACTTAACCAG TTACTTTGAA AATGACTGGC TGAGCACTCG TCTCTCCTAC
AACTACAGAA CAGACTTCGC CACGGGCATA GGTGAGGAGG TAAGCGATGA TATTGGCCAG
CTCGATCTCA ACCTCTCATT TATGCTGACG GAGCAACTCT CTCTGGTTTT TGAGGGGATT
AATCTCACCG ATGAGATTAT TTACACCTAT GAGAGGAACC AATATGCCCC CGTAGGTATC
TACAGAAACG GAAGACGTTT TTATGCTGGC GCAAGATTCT CTTTTTAA
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| Protein sequence | MSISSLRYLL PVLLLPVTTQ ITYANQAGSE HSDADTLEKI QIRGIRGSVI KSINTKRTSV
SVVDAITAED IGKFPDKNVA ESLQRITGVS LTRVQGEGER VGVRGTAPSQ NQTYINGQNI
ASADWWISSQ PNRGFNYTML PSEIVSSLEV NKAPEADHDE GSLGGSINIK TRKPLETENH
MFVGTAQMQY SESSEELDPQ LSLLYNWINE DDNFGALISL IRHERHLRRD GLESWGWAER
NFNIDQQGRL SQTQQESADL QDIWSPGGGG SALFEQHRVR SSAMLSLQYQ PDLDWNIEFE
TLYSQLDANN SNQNFLWQPS TVYGRGGKIS DYQIQDNTLT SATYSQVPTD NPSGIPFSTA
MEAIWRESKI DTSIYHLLVE HEFDYWKSQY QIGYTRASGG TSGDFTSQWS ANTDFTVNTQ
TARDIQTQYT TSPLQGDAWA ISEVRQDSHN SVDDELFAQI DFEHQLDREF IDSIKFGVKY
KRHTRDFIRY RSRNGGYQGL AGDLGWTLAD FPANFPDNYL EGVGSLNTLK RYAYADTGAL
NSAYNDLNFI RTEEKPSSFD IKENSYAGYT KVNFSGDSYR GNLGVRVVHT QQTASAYQQV
PSDDADNLEY LWSTSDKSYT DILPSINIAM DWREDLVFRV AASKVMSRPE YHHLMPSTNY
NVTQAQGAGG NPDLDPFRAT KFDIALEWYF DEAALLSIAL FHKDVKSFID IKRYEEEYEN
IEMIINRPIN GSGGTIRGAE LSWQQEIIYG VGIIANYTYI DGERKDSETG EHIKIPGHSD
HSANLTSYFE NDWLSTRLSY NYRTDFATGI GEEVSDDIGQ LDLNLSFMLT EQLSLVFEGI
NLTDEIIYTY ERNQYAPVGI YRNGRRFYAG ARFSF
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