| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2923 |
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| Symbol | |
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| ID | 6117238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3578491 |
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| End bp | 3580626 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634467 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001761291 |
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| Protein GI | 170727265 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTAA GTTGTTCCAG TAAAGTAATG GTCAATGAGA TTGAGGTCGA TTTTGTCGCA
CTTAAACTCT TGATTGATGG AGAATGGCTC GAGATTGAGG CCAGGCAGCT TGCCCTGCTT
AAATTACTGA TTAAACACCA CGGTGAAGCT GTATCACGTA ATTTGATTAT GGATGAGATA
TGGCATGACA CTATTGTCAG TGACAACTCT GTCTCTCAAG CCATTACTCA GCTAAGAAAA
TCCCTTCAAG ATGATAAAGG TACTCCTAGG TTTATTCGCA CAGTCCCTAG GGTCGGCTAT
CAGCTAATTG CGACGATTGA AGAGGTTAAG GAGCCTGAGA GTCTTGAAGG GTTAAGCGTG
GTTAAACGTA CCTCAAAACC GACGACGGCT TTGATTGGTA TCGCCTTAGG CATGGTATTG
ATGTTCGGTC TATTTCAGTT GACTAAACCT AGCCTATCAC TGCCCACCTA TGAATATGAA
ACTCGGTTGA CCTCTGTTCC TGGTCCAGAG GGATTTTTGC GTTACTCTCC CGATGGACGC
TATCTGGCCT TTAGTCAGAT CTCAGACAAT CGCAGTCAGA TGGATCTGGT TGTCTATGAC
TCACAAACAG AGACTATCCA TTCGATTAAA AGTACAGGGT ACAGCGAAGA AGCTCCTGAA
TGGTCTCCAG ATAGTCAGTG GCTTATCTAT TATCGTCATG ATCCCCTCAG TTGTGATATC
CGCATTATGT CAGTCTCTAC CCCAGTAGAG ACCTGGCGAT TGAGTCCAGA TAGGCACTTG
GGAGATTGTG AACCAGGCTA TAGCAGGCAA AAGATGCATT GGGTATCTAG TGACACTCTG
TATCGCCGCA GGTGGCGAGA TAATCAAGCC ATATTGACTA AGATCAGTCT GTCAAATGAT
GACTCGCCTC AGATAGTTCA GCAGCGAGAT CTCCCAGAGT TCTCTCCTCT GCTGATGGAT
ATTGATAAAG AGAGCTTGTT GATGTTGTTG GTTGAAAAAC GCCAAAAGTG GTTTGAACTC
AGATTAGTTG ACCTTGCTAA TTTGACCAGT GAAGTCATTG ATCGCAGTGA GCAAGATTAC
TGGGGGCTTA AGTGGCATAA CGTTAATGAA AGCTTTTGGC TAGGTAATAA TAGCTTACGC
TTAATGTCAC TCGATGGTGA AAGCGAAGTG GTGCATGATC CGATAGGCTT TATTCCCGAT
ATCGACGTGA ATCGAGTGAC CCAGCAACTG GCTTACTCTG AAGGGCAGGT TAATGTGAAC
CTGTATAATA TCGACCTTCA TCATCAATCG AACAGTGGTG AGGTGAAAAG CCGACAGGTC
TCCTCATCAG CTCGCACAGA TATATTACCT ACCATGTCAA AAGAGGGAGA TCAGATGGCG
TTTGTCTCCT TTCAGCGTGG CGCTGCCGAT GGGCTGAGTC ATGTTGAGAT CTGGTTAAAG
CATAAACATA AAAAAGCGGC CAGCTTACTC ACAAATCTTG CAGAAAACAT CAAGCCTGAT
TACCTATTAT GGTCACCAAA TGGAGAGAAT ATCCTCTTAG GTGACACAGA AGATAAACTC
TACTTAATTA ATACCTTTAG TCGACATATG GTGCCAATTG TTTCTGGTTA TGAACAGCTT
GATGCTGTGG TGTGGTCAGC AGATGGTAAA CGTATCCATT TCTCTGCATT GGATGAAGGC
GAGTGGCAGC CCTGGATGTA TGATCTTCAG CTAGGGACAT CAACACCAGT GGAGGAGACA
GGCCAAGAGA AGGGGAAGTT GCAGGATGTG TCGATGAAAA ATCTCAACCC CTCTTTTATC
AATTATTCGG CTCGCATTGC TGATTTCTTG TCACTTAAAC TTGCTCCAGA GCTTGGGCTT
TATGATCTTC AGCCCTCCTT AAGCTTGTAT CGTCCAGCTA TCACAGAGCA GGGGATCTAT
TATGTGGTGA GGCAAGGCTT GTTACTTAAG CTCTATTATT ATGAATTTGA TACTAACCAT
AACCGCTTGA TAAGTCATAT TGGTAACCAT GAGCAGGATT TTGCTTTGAC CTTAAGTGTT
AGTGCATCGG ATGATGGCAA ACGGGTGGTT TACTCTAAAG TTGAAAATGT TGAAACAGAT
ATCCTGCTAC AGAGGAAGAT GGAGCTAGAT AAATAA
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| Protein sequence | MSLSCSSKVM VNEIEVDFVA LKLLIDGEWL EIEARQLALL KLLIKHHGEA VSRNLIMDEI
WHDTIVSDNS VSQAITQLRK SLQDDKGTPR FIRTVPRVGY QLIATIEEVK EPESLEGLSV
VKRTSKPTTA LIGIALGMVL MFGLFQLTKP SLSLPTYEYE TRLTSVPGPE GFLRYSPDGR
YLAFSQISDN RSQMDLVVYD SQTETIHSIK STGYSEEAPE WSPDSQWLIY YRHDPLSCDI
RIMSVSTPVE TWRLSPDRHL GDCEPGYSRQ KMHWVSSDTL YRRRWRDNQA ILTKISLSND
DSPQIVQQRD LPEFSPLLMD IDKESLLMLL VEKRQKWFEL RLVDLANLTS EVIDRSEQDY
WGLKWHNVNE SFWLGNNSLR LMSLDGESEV VHDPIGFIPD IDVNRVTQQL AYSEGQVNVN
LYNIDLHHQS NSGEVKSRQV SSSARTDILP TMSKEGDQMA FVSFQRGAAD GLSHVEIWLK
HKHKKAASLL TNLAENIKPD YLLWSPNGEN ILLGDTEDKL YLINTFSRHM VPIVSGYEQL
DAVVWSADGK RIHFSALDEG EWQPWMYDLQ LGTSTPVEET GQEKGKLQDV SMKNLNPSFI
NYSARIADFL SLKLAPELGL YDLQPSLSLY RPAITEQGIY YVVRQGLLLK LYYYEFDTNH
NRLISHIGNH EQDFALTLSV SASDDGKRVV YSKVENVETD ILLQRKMELD K
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