| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2922 |
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| Symbol | |
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| ID | 6117237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3577078 |
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| End bp | 3578454 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634466 |
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| Product | TonB family protein |
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| Protein accession | YP_001761290 |
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| Protein GI | 170727264 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.947626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAT TTTACCTTTC AATTATCATT TTTTTATCGC TGGTATTCTC CTCAAACTCC
AGAGCGGACT TGTTGTCGGC AACACTTGAG TACAATAAAG GTAACTATCT CTCCTCCTAT
CAAGAGTTCC ACCGACTGGC CCAACTGGGT AACCGTGATG CCATCTTTAA CATAGGCGTA
ATGTACCTTC ATGGCCAAGG GGTCGAAAAA AACCTAACCT CAGCTCACTC CTGGTTTCTA
CTTGCTGCAG ACTTTGGTGT CGACGAAGCA CGCTCTGCAG CTAGATTGAT TGAGGTAGAG
GTCGATGACC AAGAGGGACT TGATAGAGAT TACCAGCTAT TAAATCAAAA ATTTAGCTAC
ACTATATTCA GTCGTGATCT GCAACCCATC TTCAGTCCCA TTCAATATAA TGATGATAAA
CAGCCTAAGC GAACCTATAC CTTAGATGCG AAATATCCCC AAGAGGCCTA TGAGCAAGGT
CAAGAGGGCT GGGTCTGGCT AGATTTTGAT ATTGACCAAT CAGGAGCTGT CAAAGATGTT
GAGATTTTAG ACTCCTTCCC CGACAACACC TTTAACCGTG CCATCTATAA CGCAGTTCGC
CGCTGGCGCT ACGAGCCCTA TATGGTTAAT GGCAAGGCTC AAATTTACCG TAACCGTTCA
CTCATCTATC ACTTCACCAC ATTTAAAGGC AAGCGCTACC AAGAGAGCTT TGCCAGTCAA
AAGCGTGAAT ACCAGAAGAA AATTAACCAG TTAATTGACA GTGCAGAACA AGGCAATGCC
ATTGTACAGT ACTATATTGC TAATTGGATG ATAGCCGATG AGCACAATGC GACACGCCTG
CTCAAGTTTC ATTGGAGTGA TGACAATGCA GGCTCTCAAC TCCTGCTCTC CTCTGCCAGT
AATGGTTACT CCAACTCACA ATATCGTTTA GGTTCCAGTC TATTACGTGG GGAATATACA
CAAGCAAGTC GCCAAAAAGG ATTAAATTGG ATCTTGCTTG CGGCTCAAGG GGGATTTATT
CATGCTCAAT ATCGACTGGC TAGAGAACTT TTAGATAGGC AGCATGTAGA GTTTGATCAG
GAAAAGTCCC AGCGATGGAT GAAAGCTGCC GCCGACAATG GTCACTTCAG AGCTATCCGA
GATCTGGTCA ATCAAGGTAT TGATGCTAAA GATTTTACCA GCTCTCTGCA CTACCTTAAA
TTAGGTTTGA AACAGGATGA CTCTCACCCA GATCTTCTCT TGGCTCAAGC AAAAATCTTT
AAGCATCAAG GGCAACACGC TCTGGCGGTA AAAAAAGCAC AACAAGCCTT AAAGGAGGCA
AAAGATAGAG GCTGGTACAC ACAAGAGATC AGTCAATACC TTCAAAGCTT AAACTAA
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| Protein sequence | MMKFYLSIII FLSLVFSSNS RADLLSATLE YNKGNYLSSY QEFHRLAQLG NRDAIFNIGV
MYLHGQGVEK NLTSAHSWFL LAADFGVDEA RSAARLIEVE VDDQEGLDRD YQLLNQKFSY
TIFSRDLQPI FSPIQYNDDK QPKRTYTLDA KYPQEAYEQG QEGWVWLDFD IDQSGAVKDV
EILDSFPDNT FNRAIYNAVR RWRYEPYMVN GKAQIYRNRS LIYHFTTFKG KRYQESFASQ
KREYQKKINQ LIDSAEQGNA IVQYYIANWM IADEHNATRL LKFHWSDDNA GSQLLLSSAS
NGYSNSQYRL GSSLLRGEYT QASRQKGLNW ILLAAQGGFI HAQYRLAREL LDRQHVEFDQ
EKSQRWMKAA ADNGHFRAIR DLVNQGIDAK DFTSSLHYLK LGLKQDDSHP DLLLAQAKIF
KHQGQHALAV KKAQQALKEA KDRGWYTQEI SQYLQSLN
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