| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2921 |
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| Symbol | |
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| ID | 6117236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3574192 |
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| End bp | 3576771 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634465 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001761289 |
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| Protein GI | 170727263 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC ACAAGAGAAG CTTACTAGAT TCAGCAATTA AGCATGCACT ATTTGTTGGC
GCAGTATCGA TGCCAATGCT CAGTTTTGCG GCTGAACAAA GTGAAACGAC ACCAAGCCTT
GATACCGATG AAGTAGAAAC GATCCAAGTT CGCGGGATCC GAGGCAGTGT GATCAAATCA
CTTAACACTA AACGCTATTC TAATTCAGTT GTCGATGCGG TGACCTCAGA AGATATTGGG
AAATTTCCCG ATCAAAATGT TGCCGAATCA CTTCAACGTG TCACAGGTGT TTCCATCACA
CGTAACTTTG GTGAAGGTGA ACGTGTCAGC ATACGCGGAA CAACAGAGAG TCAAAACAGA
ACTTTATTAA ATGGACAAGC TGTTGGCTCT GCGGATTGGT GGACTAACTC TCCCGCTAAC
CGTGGTTTTA ACTACACCAT GCTCCCCTCC GAAATCGTAT CTGGTTTAGA GGTTTATAAG
TCGCCAGAAG CGGATATCGA CGAAGGCTCA ATTGGTGGTA CTGTCATTGT CAGAACCCGC
AAACCACTAG AGCTCGAGTC CAATAAATTT GCAGGCTCCG CATTAGCGCA ATACAGTGAA
ATATCTGGTG AAACCGACCC TCAGCTTTCA GGTATGTACA GCTGGAAAAA CTATGATGAA
ACCTTCGGGG CACTTATCTC TGTGGTTCGT CAAGAGCGTA ACCTAAGACG CGATGGGATT
GAATCATGGA GTTGGACCGA CAGAGATATC ACTCTCGAAG ATGGTACAGT ATATAAAGAT
GTCTACAGCC CAGGGGGCGG TGGCTCGGCT ATGTTCCAGC AAGAGCGTGT CCGTACGGGT
ATCAATCTCA GCCTGCAATA TCGCCCAACG TCGAACTTAG ACATGACATT TAATGCATTA
GATTCGACCC TCCAAGCTGA TAATGAAAAC CAAAACTTCC TCTGGTTACC TGGTTACGGT
GACTCTCAAT ACACCTCTGT CGATCTCATC GAGCATCCAG AAGTGGGAAC CATGCTCACC
GGCGGCACCA TAGGGTTGTC ACCTACAGGT GATAATATCT TAGATGAAAC TAAGGTCAGA
AACTCTAAAC TTAAAACCAA GTCCTATGAT TTTAAAATCG ATCATATTGG CGATCTCTGG
AGCTCAAGTG TCCATTTAGG CTACACCGAA GGCACAGGTG GCTCTCAAGC AGACCGAAGC
GTTGGTTGGG GCGGTAACTA TGTACACAGT TTCGACGCCT CCTCTGCACG AGATGTTAAA
ACCCACTATG GTGCCAACCC TGCCGATGGC AGTAAATGGG ATCTTAACTT CCTGCGCTAT
GATAGAAATG ACGCCAAAGA TGACGAGTTC TATATTCAAG CCGACTTTGA ACGAGATATC
GATCTGGCTA TCTTTAGCAA AATAAAGTTT GGTGCAAAAT ATCGCGATCA CTCCCGTTTC
AACACGAAAC AAACCACGGA TAACCGTACA GATCTTGGAT GGAACCTTGC AGATTACTCC
CTGCCTATGC CATCAGACTT CCTTGAACAT CAAGGTTCAA GCGGCACCTT AAAAGACTAC
GCCATTACAG ATTCTGACAA GGTACGTAGC GAAGGCGATG CACTAGGTTG GAACTATCGA
ACCTTAGAGG CAAGTACCTT CGACATAGGT GAGAAAATCT ACGCCGCTTA CGTTAAAGCC
GATATCGATG TGGAATACCT TCGAGGCAAT ATAGGTGTGC GTATCGTGCA AACCAACCAG
TCTTCCTCAG CGTTTGTCGG TGAAGAGGGA CAAGGAGTTT GGACAACAAC AGATAAAGAT
TACTTGGAAA TTCTGCCAAG CCTAAACTTA GCCGTTGACC TTGATGACGA TGTTATCTTA
AGAATGAGTG CATCGCGCGT CATGTCGCGT CCAAATTATG TGGATATGAC CTCATCAACC
TCCTATAACC TAGAAACCCA AACGGGTACA GGCGGTAACC CAGATATCGA CCCATATCTA
GCGACTCAGT TTGACCTTGG TGTTGAGTGG TACTTCAATG AAGCGGGTAT CTTCTCTGCC
ATGTTATTTC ACAAAGATAT CCAATCCTTT ATTGAACAAA AAGGCAATCT AGAGATCCAT
GAAAACACTG AGATCTTAGT CAATCGCCCC ATTAATGGAA ACGGCGGAAC CATCATGGGG
CTAGAGCTAG GCTATCAGCA GGAGTTATTT GAGAACTTTG GTATCTCAGC AAACTACACC
TTTGTTGATG GTGAAGCAAA AGACGGTGAA GGCAATGATG TCACTATACC TGGTAACTCA
GAGCATACAG TGAACTTAAG CTCATATTAT GAAAATGAGG ACTTCAGTGG CCGGATCTCA
TACAACTACC GCACAGGCTA CGACACAGGT TTAGGATGGC CAGGTTACAT CGATGACTAC
GGTCAACTCG ATGCCAACAT TAGCTATCAA GTTACTGACA ATATCACCAT TGTGCTTGAA
GCCATTAACT TAACAGACGA ACAAACATTC AGCTATCAAC AAGAGGGGGT AGACCAAGCA
CTAACCGGCC TCTACGCAGA TGGCAGACGA TTTGTCACAG GAGTACGTTT TAATTTCTAG
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| Protein sequence | MKIHKRSLLD SAIKHALFVG AVSMPMLSFA AEQSETTPSL DTDEVETIQV RGIRGSVIKS
LNTKRYSNSV VDAVTSEDIG KFPDQNVAES LQRVTGVSIT RNFGEGERVS IRGTTESQNR
TLLNGQAVGS ADWWTNSPAN RGFNYTMLPS EIVSGLEVYK SPEADIDEGS IGGTVIVRTR
KPLELESNKF AGSALAQYSE ISGETDPQLS GMYSWKNYDE TFGALISVVR QERNLRRDGI
ESWSWTDRDI TLEDGTVYKD VYSPGGGGSA MFQQERVRTG INLSLQYRPT SNLDMTFNAL
DSTLQADNEN QNFLWLPGYG DSQYTSVDLI EHPEVGTMLT GGTIGLSPTG DNILDETKVR
NSKLKTKSYD FKIDHIGDLW SSSVHLGYTE GTGGSQADRS VGWGGNYVHS FDASSARDVK
THYGANPADG SKWDLNFLRY DRNDAKDDEF YIQADFERDI DLAIFSKIKF GAKYRDHSRF
NTKQTTDNRT DLGWNLADYS LPMPSDFLEH QGSSGTLKDY AITDSDKVRS EGDALGWNYR
TLEASTFDIG EKIYAAYVKA DIDVEYLRGN IGVRIVQTNQ SSSAFVGEEG QGVWTTTDKD
YLEILPSLNL AVDLDDDVIL RMSASRVMSR PNYVDMTSST SYNLETQTGT GGNPDIDPYL
ATQFDLGVEW YFNEAGIFSA MLFHKDIQSF IEQKGNLEIH ENTEILVNRP INGNGGTIMG
LELGYQQELF ENFGISANYT FVDGEAKDGE GNDVTIPGNS EHTVNLSSYY ENEDFSGRIS
YNYRTGYDTG LGWPGYIDDY GQLDANISYQ VTDNITIVLE AINLTDEQTF SYQQEGVDQA
LTGLYADGRR FVTGVRFNF
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