Gene Swoo_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2918 
Symbol 
ID6117233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3567465 
End bp3568637 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content41% 
IMG OID641634462 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001761286 
Protein GI170727260 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.271043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.722363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG AACAAGATAT TTCAAATGTT CGTGTTGGCA TGTATGTTCT GGACATTACC 
TATCCGAAAG GAAAATTTCA CTTAACCAAG GCCAGTTGGT TAGAGAGTGA AGGCGTTATT
GAGAATTTAA GAAGTAAAGG GGTTTTGCGC GTCCTTATTG ATACCAGTAA GACAAGAGAT
GAGCCTTTGT CTGCTCTATC GCTGGTGATT GAAAGCACTG CTCCCTCTTT TACTCAGCAG
GTTGAGAAAG CCAGGCAAAT TTTTGATGAG TCGAAAAATA TTCAGAAAAA GTTATTTCAT
GCGGCAAAAA ATGGATTTTC ATTGGATCTA AACTCGGTTA GTAAGGTGAC CGATGAATCT
ATAGAGATCA TTTTTAACAA TCCAGACGCG CTCTCTTGCG TGCTTAATAT ACGACATAAA
GATGAATATC TTCTAGAACA CTCCGTTGCA GTATCTGTGT TGATCACCAT GTTTGCTTTT
CATATGAAGT TGGAGAGAGA GATTGTCAGT CAGTTAGCCA TTGGGGCTTT TCTGCACGAT
GTGGGTAAGA TCATGGTACC TGATGCTATT CTTAATAAGC CTGGAAAGTT GACTGATAAT
GAGTTCAACA TCATGAAAAG TCATGCCACT CACTCTATTA ATACGATCAA AAAAACGCCG
GGCGTCAGTG CATTAAGTTT GGAAGTTGCA GCTCAGCATC ATGAAAAGCT TAATGGTGAG
GGCTATCCTA ACGGACTGAA GAGTAATGAG ATCTCTATCT ATGGACGTAT GATCTCTATC
TGCGACATCT TTGATGCATT GACATCTAGC CGTTGTTATA AAAAAGGCTA CTCACAAGTT
AAGGCTTTCA GTATCTTAAG GGCGCTAGCC AAAGAGAATC AACTCGATGC TGATTTAGTT
GATAATTTCA TTCAGTGCCT AGGGGTTTAC CCTGTTGGGG CTATTGTTCA GCTTGATTCA
AACCGCTTAG CTATCGTTGA GAGTCACAAT AAAAAAAACC CAGTTCGCCC AAAAGTTAAA
GCCTTCTACC GGCTAGATCC AAAACAGTTT GAGATGGCAC AAAATATTGA TTTGGCCTCG
ATGGAGACTG AGCATATTGT TAAGTGCGTA AGAGCCGATG AGTTCGATCT TAATATGGAG
CAGATCATCG AGTACTTAGC TCGCGAAGGG TGA
 
Protein sequence
MIVEQDISNV RVGMYVLDIT YPKGKFHLTK ASWLESEGVI ENLRSKGVLR VLIDTSKTRD 
EPLSALSLVI ESTAPSFTQQ VEKARQIFDE SKNIQKKLFH AAKNGFSLDL NSVSKVTDES
IEIIFNNPDA LSCVLNIRHK DEYLLEHSVA VSVLITMFAF HMKLEREIVS QLAIGAFLHD
VGKIMVPDAI LNKPGKLTDN EFNIMKSHAT HSINTIKKTP GVSALSLEVA AQHHEKLNGE
GYPNGLKSNE ISIYGRMISI CDIFDALTSS RCYKKGYSQV KAFSILRALA KENQLDADLV
DNFIQCLGVY PVGAIVQLDS NRLAIVESHN KKNPVRPKVK AFYRLDPKQF EMAQNIDLAS
METEHIVKCV RADEFDLNME QIIEYLAREG