| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2917 |
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| Symbol | trpA |
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| ID | 6117232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3566576 |
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| End bp | 3567394 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634461 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001761285 |
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| Protein GI | 170727259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.410631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.883222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAT CTAAACAAGC AGGCCGTTAT CAGGCAGCCT TTGCCAAACT TGAGGCAAAA
AACCAGGGGG CATTTGTTCC TTTTGTCACC TTAGGCGACC CTAGCCCCGA AATATCTTTA
AAAATTATCG ACTGTTTAGT TGAAAATGGC GCCGATGCGT TAGAGTTAGG CTTTCCTTTC
TCAGACCCAT TAGCCGATGG CCCGGTTATT CAAGGAGCCA ACCTACGCTC TCTTGCTGCT
GGCACCACAC CAAGTCAATG CTTTGAGATG CTCAGTACAA TTCGCGCTAA GTACCCAGAG
TTACCCATAG GGTTGCTTCT GTACGCAAAC TTGGTCTATG CCAATGGTAT CGAAAATTTT
TATGCGAAAG CTCAAGCGGC AGGTGTTGAT TCAGTGTTGA TTGCCGATGT ACCTGTTGAA
GAGGCTGAAC CTTTCATCAC GTCAGCTAAA GCCCATGGAG TGGCACCAAT CTTTATCGCT
CCGCCCAACG CAGACAGTGA CACATTAAAG CTGGTCAGTG AAAAAGGTGA AGGATATACC
TACCTTCTCT CCCGTGCAGG AGTGACGGGC ACAGAGTCTA AAGCTGGTAT GCCGATTGAC
GATATTCTCG CTAGGCTAAA GGAGTTTAAC GCAGCCCCGC CCTTGCTTGG GTTCGGTATT
GCCGAGCCCG CTCAAGTGAG AGAAGCGATT CAAGCTGGCG CAGCTGGCGC CATATCAGGC
TCTGCGGTGG TAAAAATCAT CGAAGCAAAC AAAGATAATG AAACAGAGCT TCTCACTAAG
TTAGGTGAAT TTACCCGTAA TATGAAGGCT GCTACTTAG
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| Protein sequence | MTESKQAGRY QAAFAKLEAK NQGAFVPFVT LGDPSPEISL KIIDCLVENG ADALELGFPF
SDPLADGPVI QGANLRSLAA GTTPSQCFEM LSTIRAKYPE LPIGLLLYAN LVYANGIENF
YAKAQAAGVD SVLIADVPVE EAEPFITSAK AHGVAPIFIA PPNADSDTLK LVSEKGEGYT
YLLSRAGVTG TESKAGMPID DILARLKEFN AAPPLLGFGI AEPAQVREAI QAGAAGAISG
SAVVKIIEAN KDNETELLTK LGEFTRNMKA AT
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