Gene Swoo_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2909 
Symbol 
ID6117224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3557691 
End bp3558479 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content45% 
IMG OID641634453 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001761277 
Protein GI170727251 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.136298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGGA CTCAAAAAAG TTTACCTCTT GCCATTGTTA GAGGCGAGCC AGTTAAGAAT 
TTTCCGGCTG ATCTTTTTAT ACCGCCAGAA GCGTTAGAAG TTTTTCTCGA GTCTTTTGAA
GGTCCTTTGG ATCTTCTTTT ATATTTGATC CGTAAACAGA AATTAGATGT GGTAGAGCTA
CCTATCTGGC CTGTGACAGA GCAATATTTA GAGTATATTG AGTTGTTACA AGGTGCGCGA
GTTGAGCTTG CTGCTGATTA TTTAGTGATG GCTGCGACAT TGGCTGAGAT TAAGTCTCGG
TTATTACTGC CGCGTCCTAA GAGTGAAGTT GAAGATGAAG AAGATCCTCG TGCTCAATTA
ATTCGTCAAC TGAAAGCCTA TGAGGTGATT AAGCTGGCGC AGCAGGAGTT AGATTCGCTT
CCTCGGCTAG AGCGGGATAT TTTTCAGGCC AAAGCAGCAC CTGCACCGGA TATTAAACCT
GTGTTATTGC CACCTAGTGT TTCATTAGCG GATATGGCGA GAGCCTTTGC TTCTGTACTT
CAGCGAGTCG AAGCAACTGA AGATCACCAT GTAAAGCGAG AGGTGTTGTC GACGCGTGAG
CGAATGACTC AGATCCTTGC CCTGCTAGAT GGTGAAGATT ATCTGCCGTT TGAAGCACTG
TTTGATGTCA AAGAGGGGCG CAGCGGAGTG GTGGTAAGTT TTCTGGCCTT AATGGAGCTG
GTCAAAGAGC TTTTAGTGGA GTTGATACAA GCTGAGCCAT TTTCAACCAT ACATGTTAAG
GCTTATTGA
 
Protein sequence
MQGTQKSLPL AIVRGEPVKN FPADLFIPPE ALEVFLESFE GPLDLLLYLI RKQKLDVVEL 
PIWPVTEQYL EYIELLQGAR VELAADYLVM AATLAEIKSR LLLPRPKSEV EDEEDPRAQL
IRQLKAYEVI KLAQQELDSL PRLERDIFQA KAAPAPDIKP VLLPPSVSLA DMARAFASVL
QRVEATEDHH VKREVLSTRE RMTQILALLD GEDYLPFEAL FDVKEGRSGV VVSFLALMEL
VKELLVELIQ AEPFSTIHVK AY