| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2908 |
|---|
| Symbol | |
|---|
| ID | 6117223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3557010 |
|---|
| End bp | 3557690 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641634452 |
|---|
| Product | segregation and condensation protein B |
|---|
| Protein accession | YP_001761276 |
|---|
| Protein GI | 170727250 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0704465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAAAGA GTAAATTATT ACAGATTAAT CCAGATCAGC TTAAACAGCT TATTGAAGCC
GCCCTGTTTG TGATGGGAAA AACGGTGACA ATAAAAGGTT TAAGGGAGAC GGTACTGGTA
AACTTCAATG TATCAAGGGC TAAAGTTAAA TTAGCGATTG AAGAGTTACA GGAAGATTAC
CAAGGGCGAG GGGTTGAGTT GGTTGCTGTT GCCGGTGGTT ATCGCTTTCA AACAGTAGAA
GCCTTAAGTC CGTATCTTCA GTGTATGTGG CAAGAGAAAG CCCCAAAATA TTCGAGAGCG
ACGTTAGAAA CCTTAGCGGT TATTGCATAT CGTCAACCTG TTACCCGAGG TGATATTGAA
TTTGTACGTG GTGTGGCAGT GAGCAGCCAT ACCATTAAAA CCCTGTCCGA TAGACATTGG
ATCAGAGCGG TAGGGCATAA AGAGGTACCG GGAAGACCGG CGCTTTATGG TACTACAGCA
GAATTTTTAG CTTACTTTGG CTTAGATACG TTAGCGGATC TCCCTCCGTT GTCAGATCCT
GAGTCACTAG CGGCACTGTT TTCAAATGCA GAGTCCTCAA ATGTTCCTGT ATCGGAAGAT
GAAACGGTGA ATATTGAGCA CTTGGCAGAT GAAACTGAGC CTACAGAAAC ACAAAATAGA
GAAGAGTCTA CTAATGAGTG A
|
|---|
| Protein sequence | MSKSKLLQIN PDQLKQLIEA ALFVMGKTVT IKGLRETVLV NFNVSRAKVK LAIEELQEDY
QGRGVELVAV AGGYRFQTVE ALSPYLQCMW QEKAPKYSRA TLETLAVIAY RQPVTRGDIE
FVRGVAVSSH TIKTLSDRHW IRAVGHKEVP GRPALYGTTA EFLAYFGLDT LADLPPLSDP
ESLAALFSNA ESSNVPVSED ETVNIEHLAD ETEPTETQNR EESTNE
|
|---|
| |