| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2903 |
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| Symbol | |
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| ID | 6117218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3550331 |
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| End bp | 3551362 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634447 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001761271 |
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| Protein GI | 170727245 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000180746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0386673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAATTTT TGTACGAGTA TGGGATGTTT TTTGCTAAAG CGATCACGGT CGTGTTATCG
ATTATTGCGG TTGTGATTGT TATTTTAGCG TCTGCTGTTA AGCAAAAAGG CGGTAAAGGT
GAGCTAAGGC TGACCAATAT CTCTGAAGAG TTGAAGGAGT TGCAACACGA TCTTAAAGAG
GAGCTGTACA CTAAACAGCA GTTTAAAGCT TACGAGAAGC AGCTTAAAGC CGATGAGAAG
GCCAAAGAGA AGGCGCTTAA AGAGCAGAAA GAACCTGTCT CTGAGCCAAG AGTCTTTGTG
GTTGATTTTA AAGGTAGCAT AGACGCCAAT GAGGTTTCAT CGCTGCGTGA AGAGATCAGT
GCCATTATCG CAATTGCAGA ACCTGGTGAT GAAGCCATTG TGAATGTAGA GAGTGGCGGC
GGTATGGTTC ATGGTTATGG CTTAGCCTCG AGTCAACTAG ACCGTCTTCG TCAGGCTAAT
ATTCATCTTA CAATCTGTGT GGATAAAGTA GCAGCCAGTG GCGGTTACAT GATGGCCTGT
GTTGCTAATA AAGTGTATGC GGCTCCCTTT GCTATTGTTG GCTCTATTGG GGTGGTAGCA
CAAGTACCAA ACTTCAATAA ACTGCTGAAA AAACATGATA TTGATTATGA GCAACACACG
GCAGGTGATT TTAAGCGCAC CTTGACCGTA TTTGGTGAGA ACACAGATGA AGGGCGTGAG
AAGTTCCAGC AGGAGCTTGA GGAGACCCAT GAGTTATTTA AAGGCTTTAT CTCTCAATAC
CGTCCTGAGC TTGAGCTTGC GAAAGTCGCC ACCGGTGAGC ATTGGTATGG GCAGCAAGCG
ATTGAGCTTG GCTTAATTGA TGCCATCGCT ACCAGTGATG ATGTGGTGAT GAACTTAGCC
AAAGAGCGAA CAGTGATAAG AGTCAAGTAT CAGCTTAAGA AGAAGTTTGC CGATAAGCTT
GCTCATGCGG CTTCTTTGTC TGTGAGCTCA GTCTTTAATA AAATGGCTGA GAAAAACCAG
CCACTGACCT AG
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| Protein sequence | MEFLYEYGMF FAKAITVVLS IIAVVIVILA SAVKQKGGKG ELRLTNISEE LKELQHDLKE
ELYTKQQFKA YEKQLKADEK AKEKALKEQK EPVSEPRVFV VDFKGSIDAN EVSSLREEIS
AIIAIAEPGD EAIVNVESGG GMVHGYGLAS SQLDRLRQAN IHLTICVDKV AASGGYMMAC
VANKVYAAPF AIVGSIGVVA QVPNFNKLLK KHDIDYEQHT AGDFKRTLTV FGENTDEGRE
KFQQELEETH ELFKGFISQY RPELELAKVA TGEHWYGQQA IELGLIDAIA TSDDVVMNLA
KERTVIRVKY QLKKKFADKL AHAASLSVSS VFNKMAEKNQ PLT
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