| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2896 |
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| Symbol | |
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| ID | 6117211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3539865 |
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| End bp | 3542330 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634440 |
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| Product | hypothetical protein |
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| Protein accession | YP_001761264 |
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| Protein GI | 170727238 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000431502 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGATAC AACTGGCTTG GAGGCTGTTT AAACGGGAAC TGTTGCAGGG GCAACTGCTA
CTAATTGTAT TAGCGATAAC ACTCGCTGTG TTATCGGTAA CAGGTTTGGC TAGGGTCAGT
GAGCGTTTAC AGATAGCGAT TAATGGGCAG GCATCTAAAT TTATTGCCGC TGACCGAATT
ATTAACTCTC CTGTCAAGAT AGATGAGTCT ATTTTAGCTA AGGCCGATGA GCTTGGGCTG
CGCCATGTTT CCAGTATGCA GTTTAACTCT ATGGTGTTTG CGCAGGATAA GTTCCAACTT
GTTACCGTTC GCGCAGTTGA GGAGGGATAC CCTTTAAAGG GCAAGATAGA GCTTAATAAG
AAAGAGGGGG GAGAGTACTC AGAACTGCCT AGAGCAGGGC ACCTGTGGTT TGAAACCCGT
CTTGGTGGGT TATTGGGTTA CCCTAAAAGG CTTGAACTGG GTAATCAAGA GTTTAGTCTA
AGCGCTGAGA TAGCGCGTTT ACCCGATGCA GGTTTTAACC CCTTTGCCTC TTCACCTGTT
GTATTGATGA GGATAGAGGA TGTGGCAAGT ACAGGGGTTA TTCAGCCGGG TAGCCGCGTG
ACCTATCTTG CGCAATTTGC AGGCGAAGCT GAACAATTAG CTGAGTTTGA AACCTATGCA
AAACCGCTGC TTAACAGCTC TCAACGCTGG GTGGATGTGC AATCTGGCGA CTCACCCATC
GCCGACGCCG TAAAACGTGC AGAGCGTTTT CTGTTATTGG CCAGTTTACT CGGGATCGCG
CTTGCATGTG CCGCTATCGG TATCGCGGCT CAGCGATACT GTCAGCGCCA CTATGATGTG
GTTGCCATGT TAAAAACCTT TGGTGCGTCT GCAAAACAGA TCCGTATCTT GTTTGGTGTG
CATCTGCTGT TAGTGACCTT TTTCGGGGTG GTGTTAGGAC TTATTGGGGG ATTTGCCTTA
GATGGGGCGA TAACGGCTTT CTTACCAGCG GAGATCGCGG CTTACTCACC GCCATTATTG
AGGCCCATAC TGCTTGGGCT TGCCACAGGT TTTATTAGCG CCTTTATGTT TTCGGCTTAC
CCGTTAATGA GGCTTCTCTC TATCCCACCT TTGCGTGTAT TACAGCGTCA GTTAGAAGGC
TTACAGCTGG GGATGTGGCT GCACCTTATT TTAAGTCTAT TAGCCATGGC TGTCCTAGGC
TATCTCTACT CTAAGAGCTT ACCGTTAACC TTGACGGTAG TGGCTGGTGT ATTGTTATTG
GGTCTGCTGT TAAGTGTGCT TGGCTTTGCC ATGATCCGTG CTGGACACAG TATCGGCATG
AAAACCACCA ATCCACTGCA ACTGGCTTTA GCGGGCTTAA GGCGACGAGC CAAGCAAAAT
GCTATACAGC TGGTGGGATT TAGTAGCGCC TTGGTCTTGC TGCTGACAAT TTTGGCTCTT
CGCCAAGATC TACTGAGTGA ATGGCAAAAT CAGCTACCTG AAAATGCGCC TAATTATTTT
CTGGTGAACA TTGCGCCGGA TGAGTCTGAG CCATTGGGCG AGTTTCTTGC ACAAAACACC
GTGAAAACCA CCGATATCTA TCCAGTTATT CGGGGGCGTC TAATCGAGAT CAATGGTGAA
AAGTTGATCT CCGCTGAGCA GGAAAAAGAG GGCGTTGAGG GCAGACGTGG GATCTCACGT
GAGTTGAATC TGACTTGGCG TGAAGAGTTA CCTGAAAACA ATGAATTACT CGAGGGGGAG
TTTAACGTTA ATGATAATGA TGTGTCTGTT GAGTCAGGTG TTGCTGAGCG ATTAGGGATA
AAACTGGGTG ATAGCCTTAC TTATGTGATT GATAACCAAA ACTTGACTGT GAATGTGACC
AGTATCAGGG AGGTGCATTG GGAGACGCTG CAACCTAACT TTTTTATGAT CTTTACTAAA
AGCTCACTCT CCTCATTTGC ACATACTTCG ATGGCCAGTT TCTATCTGGA TGAGGGACGC
TCAGATGTGG TATTGCAGAT CATTAAACAG TTTCCTACAG TCTCGATTAT TGATGTGGGA
AATATGATCA AGCAGCTTCG TCAAATCATA GATCAGGTAT CACTTTCACT TACATTAGTA
CTTGTGTTGG TGATCCTTGC AAGCAGCTTG GTGATGATAG CTCAGACCGA GGCAGGCATG
GCGACACGTC AAAGAGAGTT GGCGGTATTA AGGACCTTTG GTGCTTCTGG TTGGCTACTT
AGAATGGCGA CCGGGCTAGA GTTTGCTTTG CTGGGTGCCA TTGCAGGACT TCTTGCTGTG
ATAGTGGCTG AGTTTACCCT TTACCTGCTG AAAACTCAGG TGTTTGAGCT TAACGTGTAT
ATGCACTGGC CTTGGTGGGG AATAGCACCT GTGTGCGGTG CACTTATTGT GGCGCTCTTA
GGTGTGTGGC GCTGTCGTCA GCTGTTAAGT AAGTCCTGTA GTGAACTGTT AAAATCACCC
ACATAG
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| Protein sequence | MEIQLAWRLF KRELLQGQLL LIVLAITLAV LSVTGLARVS ERLQIAINGQ ASKFIAADRI
INSPVKIDES ILAKADELGL RHVSSMQFNS MVFAQDKFQL VTVRAVEEGY PLKGKIELNK
KEGGEYSELP RAGHLWFETR LGGLLGYPKR LELGNQEFSL SAEIARLPDA GFNPFASSPV
VLMRIEDVAS TGVIQPGSRV TYLAQFAGEA EQLAEFETYA KPLLNSSQRW VDVQSGDSPI
ADAVKRAERF LLLASLLGIA LACAAIGIAA QRYCQRHYDV VAMLKTFGAS AKQIRILFGV
HLLLVTFFGV VLGLIGGFAL DGAITAFLPA EIAAYSPPLL RPILLGLATG FISAFMFSAY
PLMRLLSIPP LRVLQRQLEG LQLGMWLHLI LSLLAMAVLG YLYSKSLPLT LTVVAGVLLL
GLLLSVLGFA MIRAGHSIGM KTTNPLQLAL AGLRRRAKQN AIQLVGFSSA LVLLLTILAL
RQDLLSEWQN QLPENAPNYF LVNIAPDESE PLGEFLAQNT VKTTDIYPVI RGRLIEINGE
KLISAEQEKE GVEGRRGISR ELNLTWREEL PENNELLEGE FNVNDNDVSV ESGVAERLGI
KLGDSLTYVI DNQNLTVNVT SIREVHWETL QPNFFMIFTK SSLSSFAHTS MASFYLDEGR
SDVVLQIIKQ FPTVSIIDVG NMIKQLRQII DQVSLSLTLV LVLVILASSL VMIAQTEAGM
ATRQRELAVL RTFGASGWLL RMATGLEFAL LGAIAGLLAV IVAEFTLYLL KTQVFELNVY
MHWPWWGIAP VCGALIVALL GVWRCRQLLS KSCSELLKSP T
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