Gene Swoo_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2887 
Symbol 
ID6117202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3531467 
End bp3533608 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content47% 
IMG OID641634433 
Productphosphate acetyltransferase 
Protein accessionYP_001761257 
Protein GI170727231 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000745761 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000011303 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTCGCA ATATTATGCT AATCCCTATC GGCACAGGTG TCGGTCTCAC ATCCATCAGT 
TTAGGACTCG TTCGAGCTTT TGAGCATCAC GGTGTTAAAG TTCGCTTTTT CAAACCGATT
GCCCAGCAGC GTCCACAAGA CAGCGGACCC GAGCGTTCAA CGACTATCTT AAGTAAGTCG
CCAACTGTTA ACCCGCTTGA GCCTTTCGAT ATGGATCATG CAGAGGGACT TATTCGTGGC
GATAAGACTG ACGTCTTGAT GGAGCAGATC ATTGCTCGCG TAACGGAGAG CACTGACGAC
ACTGAAACTC TCGTGGTTGA AGGCTTAGTT CAAACAAGAA ACCACCCGTT CTCAAGCGAT
ATCAACTATG CTATCGCAAA ATCTCTCGAT GCTGACATCA TCTTTGTTGC CACGCCAGGT
AATGAAAGTG CTACAGCCTT GATGAACCGT TTAGAGATCG CCCATAACAA ATGGGGCGGT
GTTAAGAACA AGCGTATTAT CGGCGCCATG ATCAATAAAA TTGGTGCACC TGTTGATAAC
GAAGGTCGTG CACGTCCTGA TCTATCTGAA GTGTTCGACC ATGCAGATGT TCAGCGCCCT
GACGCTGCCA GCATGTTCCA ACTTCCAGGT AAGAGTTCAC TGCGTATTTT AGGTAGTGTG
CCTTATAACT TAGACCTTGT TGCACCTCGC GCATCGGATC TTGCTAAGCA CTTAAGTGCA
AAGATCATTA ATGCTGGTGA GATGAACACT CGTCGTCTAC GTAAAGTGAC CTTCTGTGCT
CGTAGTATTC CTAACATGGT TACTCACATT AAGACTGACT CACTGTTAGT TACCTCAGGC
GATCGCTCTG ATGTGATCGT ATCAGCCTGT CTTGCAGCGA TGAACGGCGT AAAAGTCGGT
GCACTACTGC TAACCGGTAG TTATGAGCCA GAGCCAGAGA TCATGGCATT GTGTGAGCAA
GCATTCGAAA CCGGTCTACC AGTATTCCTA ATCGATACGA ATACTTGGCA GACATCGCTA
AACATTCAAC GTTTCGACCA TGAAGTCCCT GTTGATGACG CAGTGCGCAT CGAAGAGGTT
CAAGAGTATG TTGCTAGCCA TATCGACCAA AACTGGATTG AAACGGCAAC TAAAAACTCT
CCTCGTGAGC ACAGACTCTC TCCTCCTGCA TTTAGATACA AACTGACTGA GCTTGCCCGT
GCTGCCCGTA AAACAGTTGT ACTGCCTGAA GGTCATGACT CACGTACTAT CGAAGCTGCA
AGCATCTGTG CTGAACGTGG CATCGCCAAG TGTGTACTTC TTGGTAATCG TGAAGAGATC
GAACGTATCG CTGCACAACA AGGTGTCACT TTAGGTGAAG GCGTTGAGAT TGTTGAGCCT
GATACTGCAC GTGAGCGTTA TATCGAGCCT ATGCTTGATC TACGTCGTCA CAAAGGCCTA
ACTGAAGTCG TAGCCCGTGA ACAACTCGGT GACAACATGG TACTAGGGAC CATGATGCTA
GCTCAAAATG AAGTCGACGG TATTGTCTCT GGTGCGGTAA ACACCACAGC TAACACCATT
CGCCCACCAT TACAGTTGAT TAAAACGGCC CCAGGTTCAA GTTTAGTCTC GTCAATCTTC
TTTATGTTGA TGCCAGATCA AGTACTGATC TACGGTGACT GTGCAATTAA CCCTGATCCA
AATGCCGATC AACTTGCCGA TATCGCTATC CAGTCCGCAG ATTCAGCCGC GGCATTTGGT
ATCGAGCCAC GGGTTGCAAT GATCAGTTAC TCTACCGGTA GTTCAGGTAC TGGCTCTGAT
GTTGATAAGG TACGTGAAGC AACGCGTATC GCTAAAGAGA AGCGTCCAGA TCTGATCATC
GATGGTCCAT TGCAGTATGA TGCTGCGGTT ATGCCAAATG TTGCTCAATC TAAAGCCCCT
AACAGTCCTG TAGCTGGTCA AGCAACGGTA TTTGTATTCC CAGACCTAAA TACTGGTAAT
ACGACATACA AAGCAGTACA GAGAAGTGCA GACCTAATCA GTATTGGCCC AATGCTTCAA
GGTATGCGTA AGCCAGTTAA CGACCTATCA CGTGGCGCAT TGGTTGACGA TATCGTTTAC
ACCATCGCAT TAACGGCAAT TCAGGCTTCA CAAGCTGAGT AA
 
Protein sequence
MSRNIMLIPI GTGVGLTSIS LGLVRAFEHH GVKVRFFKPI AQQRPQDSGP ERSTTILSKS 
PTVNPLEPFD MDHAEGLIRG DKTDVLMEQI IARVTESTDD TETLVVEGLV QTRNHPFSSD
INYAIAKSLD ADIIFVATPG NESATALMNR LEIAHNKWGG VKNKRIIGAM INKIGAPVDN
EGRARPDLSE VFDHADVQRP DAASMFQLPG KSSLRILGSV PYNLDLVAPR ASDLAKHLSA
KIINAGEMNT RRLRKVTFCA RSIPNMVTHI KTDSLLVTSG DRSDVIVSAC LAAMNGVKVG
ALLLTGSYEP EPEIMALCEQ AFETGLPVFL IDTNTWQTSL NIQRFDHEVP VDDAVRIEEV
QEYVASHIDQ NWIETATKNS PREHRLSPPA FRYKLTELAR AARKTVVLPE GHDSRTIEAA
SICAERGIAK CVLLGNREEI ERIAAQQGVT LGEGVEIVEP DTARERYIEP MLDLRRHKGL
TEVVAREQLG DNMVLGTMML AQNEVDGIVS GAVNTTANTI RPPLQLIKTA PGSSLVSSIF
FMLMPDQVLI YGDCAINPDP NADQLADIAI QSADSAAAFG IEPRVAMISY STGSSGTGSD
VDKVREATRI AKEKRPDLII DGPLQYDAAV MPNVAQSKAP NSPVAGQATV FVFPDLNTGN
TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAS QAE