| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2876 |
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| Symbol | |
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| ID | 6117191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3516898 |
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| End bp | 3518439 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634422 |
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| Product | hypothetical protein |
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| Protein accession | YP_001761246 |
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| Protein GI | 170727220 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1288] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00586434 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGAA CAGTAACAAC TCCTTCCCAT GATAGCTCCT TAGGGAGTGT TAGTCGCTGG
CAGATGCCAG ATACCTTAGT TATCATTTTT TTTGTTGCCG TCGTGGCAGC AATGCTCACC
TATTTTATTC CTACCGGCTC ATTTCAAACC CAAGAGGTGA CCTACCTTGC TGATGGTGTA
GAGAAGAGTC GCAGTGTCAT TGACCCTAGC TCATTTGCCT ATGCGCTTGA TGATAATGGA
GAGCCTAAGT TAGCACCGGT TGGTTTATTT GAAGGCCATG GTGGTGCTGG TTTTTTTAAC
TTTGCTTTTG AAGGCTTAGT GTCAGGCTCC AAGTGGGGCA GTGCTATCGG CGTTATCATG
TTTATGTTAG TGATAGGTGG ATCCTTTGGT GTAGTGATGG CTACGGGGAC CATAGACAAT
GGTATCTTGA AGCTGATCGA CAGAACACGG GGAAATGAAT CACTTTTTAT TCCAGTTATC
TTTGTGCTGT TTTCACTTGG TGGCGCCGTT TTTGGTATGG GAGAGGAGGC GATTGCTTTC
GCCATTATCA TCTGCCCGTT AATGATACGG CTGGGATATG ATGGGATCAC GACGGTTATG
GTGACCTACG TTGCGACTCA GATAGGCTTT GCTAGTTCTT GGATGAACCC CTTTAGCGTC
GCGATTGCAC AGGGGATTGC TGGGATCCCT GTTTTATCTG GCGCAGGTGT GAGAGTGATG
ATCTGGTTTG GGTTCACGCT AATGGGGCTT ATCTTTACCA TGCGTTACGC CAATAAGGTT
AAGCTCAAGC CGCAGCATTC CTTTAGTTAC CACAGTGATG CCTATTTTCG AGAAAATCAG
AGTAAAGCTA GCTTAGAGAG CCGGTTTAAT TTAGGTGATA TTCTCGTGCT CGTCACCATT
ATTGCGACGA TAGCTTGGGT GATCTGGGGC GTGGTATCTC AAGCTTGGTT TATTCCTGAG
ATCGCCAGTC AATTTTTCAC TATGGGGGTT GTGATTGGCA TCATAGGTGT GATTTTTAAG
CTCAATGGGA TGACAGTTAA TGATGTGGCG ACAAGTTTTA AGCAAGGTGC AGCCAATATG
CTTGAGCCCT GTATTTTAGT TGGCTGTGCA TCGGGTATTT TAATACTGCT TGGCAATGGT
GGACCCAGTG AGCCGAGCGT GCTTAACTCC ATACTCAATA GTGCAGGGGA GCTTATCGGT
CAGCTTCCTA ATGCCCTTTC AGCATGGTTT ATGCTGATTT TCCAATCGGT ATTTAATTTC
TTTGTGACCT CAGGTTCAGG ACAGGCTGCG TTGACTATGC CATTAATGGC GCCGCTTGCT
GATATGGTCG GTGTAACTCG CCAAGTGTCT GTACTTGCAT TTCAGCTCGG AGATGGTTTT
AGTAATGCAA TTGTGCCGAC ATCGGCGTCA TTAATGGCGA CATTAGGCGT GTGCCGCGTG
GACTGGGGAG ACTGGCTCAA ATTTATCTGG CGTTTTATGC TGGCGCTGTT TGTTGTATCC
AGTGTGATCG TAGTTAGTGC GCACTATTTA GGGTTTAGTT AA
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| Protein sequence | MDRTVTTPSH DSSLGSVSRW QMPDTLVIIF FVAVVAAMLT YFIPTGSFQT QEVTYLADGV
EKSRSVIDPS SFAYALDDNG EPKLAPVGLF EGHGGAGFFN FAFEGLVSGS KWGSAIGVIM
FMLVIGGSFG VVMATGTIDN GILKLIDRTR GNESLFIPVI FVLFSLGGAV FGMGEEAIAF
AIIICPLMIR LGYDGITTVM VTYVATQIGF ASSWMNPFSV AIAQGIAGIP VLSGAGVRVM
IWFGFTLMGL IFTMRYANKV KLKPQHSFSY HSDAYFRENQ SKASLESRFN LGDILVLVTI
IATIAWVIWG VVSQAWFIPE IASQFFTMGV VIGIIGVIFK LNGMTVNDVA TSFKQGAANM
LEPCILVGCA SGILILLGNG GPSEPSVLNS ILNSAGELIG QLPNALSAWF MLIFQSVFNF
FVTSGSGQAA LTMPLMAPLA DMVGVTRQVS VLAFQLGDGF SNAIVPTSAS LMATLGVCRV
DWGDWLKFIW RFMLALFVVS SVIVVSAHYL GFS
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