| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2871 |
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| Symbol | |
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| ID | 6117186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3508237 |
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| End bp | 3509850 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634417 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_001761241 |
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| Protein GI | 170727215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0408599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTAC TTACTTTAGT GATATTGCCA CTTATTGGTG GTTTTTTAGC ATGTTGGAGC
CAACGTGTGC ATCAAGATGC CCCTAAGTGG ATAGCCGCTA TCTGCACACT CGTCACGTTA
GCCTTCCTAA TCTCCATTAA GCTGGCCAGT AACATAGAAG ACTTGGAATT GTGGTTAGTT
GATGAGCCGA GGGCTTGGAT CCCTAGGCTC AATATCACCG CACACCTTGC TATGGATGGA
CTGAGTTTTG TCTTACTACT TTTGACTCTG TTGATGGGAC TTGTGGGTTT ATCATCTGCT
TGGAGCGAGA TTAATCAACA TAGGGGCTTC TTTTATGGCA ACTACCTATG GACTTTAGCT
GGGATTATTG GTGTCTTCTT GGCGATGGAT CTGCTGCTGT TCTTCGTCTT CTGGGAGGTG
ATGTTGGTTC CCATGTACTT TCTTATCGCT ATTTGGGGAA ATGAAAACCG TCGTTACGCT
GCCTTAAAGT TTTTCCTCTT TACTCAGGCT GGCGGCCTAT TGATGTTATT GAGTATTATC
GCGCTGACTG TCATACATTA TCAGCAGACT GGCATACTAA GCTTCGATTA TCAGGTGTTA
GTTCAATCTC CCATCCAATC AGAGTTAGCT AAATGGATCT GCTTGGGCTT TATTATCGCT
TTTATTGTCA AGCTACCTGC TTTTCCTTTC CATACCTGGT TGCCCGATGC CCATACTCAG
GCTCCCACTC CTGCCAGTAT TATTTTAGCT GCGGTGCTTC TCAAAACTGG TGGCTATGGA
TTGCTTAGGT TTGTGCTGCC TCTATTTCCA GAATCCGCAC AATTTTGGGC TCCTCTGATG
ATGGCACTAG CAGGTGTGAG TATTATCTAC GGCGCCATCA TGGCCTTCTC ACAGACAGAT
CTTAAACGCT TAGTGGCCTA CTCCAGTGTC AGCCATATGG GTTTTGTATT ATTGGGTTGT
TTTAGTTTCA ACTTTTATGC GCTTCAAGGC GCGGTTATGC AGATGTTGGC TCACGGACTG
AGTACATCCG CTCTGTTTAT GTTAGTTGGA CTGATACAAC ATAGATTCCA CACTCGCGAT
CTCAACCATC TCGGTGGACT CTGGCACACC TTGCCTAAAC TATCAGCCAT GGGACTCTTT
TTTGGTGTAG CTTCTTTGGG GATGCCGGGA ATGGGGAATT TCATAGCAGA GTTACTGGTG
CTTTTAGGCA CCTTTAAGCA GGCGCCAATA TTCGCAATAG TGGCTAGCTC TGGCTTGATA
TTAGCAGCGG TTTACTCACT ACGCATGATC CAAAAAAGCT TCTTCGGTAT GAACTTAAAG
CTTGAGACTA GTTTGAGTGA TGAAAAATCA AGTGATAACA GCTCAAGAGA CGGCATCGAT
AACAGCTCGG CAGATTTAGG AGCAAAACAC CATAGTGATG CTCACACACG CTATGTCACA
GACCTTAGTG TTAAAGAGGG CTTAACCCTG ATGTTGATGT GCTTAGGTCT GATAGTAATG
GGGTTACATC CACAACCCAT TTTCACATTA GTGAATAGCT CGCTGATGGA GATACTCTCG
CTTATTCAGT CCCCTTTACA GCCTGAAAGC CCACTATTTG AGGTCCAGTT ATGA
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| Protein sequence | MMLLTLVILP LIGGFLACWS QRVHQDAPKW IAAICTLVTL AFLISIKLAS NIEDLELWLV
DEPRAWIPRL NITAHLAMDG LSFVLLLLTL LMGLVGLSSA WSEINQHRGF FYGNYLWTLA
GIIGVFLAMD LLLFFVFWEV MLVPMYFLIA IWGNENRRYA ALKFFLFTQA GGLLMLLSII
ALTVIHYQQT GILSFDYQVL VQSPIQSELA KWICLGFIIA FIVKLPAFPF HTWLPDAHTQ
APTPASIILA AVLLKTGGYG LLRFVLPLFP ESAQFWAPLM MALAGVSIIY GAIMAFSQTD
LKRLVAYSSV SHMGFVLLGC FSFNFYALQG AVMQMLAHGL STSALFMLVG LIQHRFHTRD
LNHLGGLWHT LPKLSAMGLF FGVASLGMPG MGNFIAELLV LLGTFKQAPI FAIVASSGLI
LAAVYSLRMI QKSFFGMNLK LETSLSDEKS SDNSSRDGID NSSADLGAKH HSDAHTRYVT
DLSVKEGLTL MLMCLGLIVM GLHPQPIFTL VNSSLMEILS LIQSPLQPES PLFEVQL
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