| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2870 |
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| Symbol | |
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| ID | 6117185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3506372 |
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| End bp | 3508240 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634416 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_001761240 |
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| Protein GI | 170727214 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0441123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATAT TGCTTAGCTT AATCCCACTA CTACCACTGC TTAGCGCCTG CTTACTGCTT
TTCTGGCAAC CTAAAGTTGC GACGACACAA GTCATCGGGG TGGGCTCGGT GAGCTTGGCA
GCACTATTAG CTGTAAGCCT TAATATAGCA CTCTGGGACC AGACACAATT TGTGCTGCAG
ACTTCATTGG GTCAATGGCT GACCATCGAT AAGCTTTCAT TGAGCTTTAC TCTCTATCTC
GACCCTCTCT CTCTGGTGAT GATCACCATC ATCACTTGTA TCGGCGCGCT GATACACCTT
TACTCGGCCA GCTACATGAA AGAGGACGCG GATATTTGTC GCTTCTTTGT TTATCTAAAT
CTATTTGTGT CAGCCATGTT ATTTCTGGTG CTCGCCGACA ACCTGATCTT GCTTTATCTG
GGCTGGGAGG GCGTGGGATT ATGCAGTTAC CTGCTTATCG GTTTTTGGTA TCGAGAGGTT
AAAAACAGTC AGGCGGCAAA CAAAGCATTT ATCATCACCC GTATTGGTGA TACCGCCATG
CTTATCGGCA TCATCTTAAT TTTTTACCAA TTCGACACCC TGAATATTCA ACAGATACAG
GCACACTCTC AGCAACTTTT ACAAAACAGT GAACTTTTAA CAAAAGGAGC TGTAGGGCTC
ACTAGCCTGT GCTGTTTACT TCTTTTTGCT GGGGCCGCAG GTAAGTCTGC CCAAGTACCG
CTTCACTCTT GGCTGCCCGA TGCGATGGCG GGCCCAACAC CTGTCAGCGC CTTAATCCAC
GCAGCAACCA TGGTCACCGC TGGAATATAC TTAGTGGCCA GAAATATCGA ACTCTTTAGT
TTAGCTCCTG ATGTACTTCA TTTTATTGCT ATTGTCGGTG TTATTACTCT AATTTTAGGT
GCAACTTCAG CACTGGCTCA AACTGATCTT AAACGCATAC TCGCCTATTC CACCATCAGC
CAGCTGGGTT ACATGTTCCT CGCACTTGGC GTTGGTTCAG CCTCTGCGGC CGTTTTTCAT
CTCATGACCC ACGCCTTCTT TAAAGCCCTA CTTTTTCTTA GTGCCGGTGC TCTTATCTAC
TGCATGCACC ATGAAAAAAA TATCTTTAAG ATGGGAGGAC TAAGAAAATC TCAACCCTTA
TTGGCGCTCT CCTTCGGCAT TGGGTGTGCT GCGCTTGCTT CGCTTCCCAT GACCTCAGGT
TTCTTTAGTA AGGAACTTAT CCTGGAGCGG ACGCTGTTTG CTCAACAGCC TATACTCTGG
TGGGGGGGCG TTGTTGGTGC ATTTTTTACG GCGCTGTATA GTGCCAAGCT ATTTTTTGTC
ATCTTTTTTG GTAAGTTAAG CAGGCCAAGT ACCCATAATA CTCCCCGAGC GATGGCAGCA
GTCCTCATAG CATTAATGTT ACTGTCACTC ATAGGAGGTA TACAGCCTCA AGGCGTATTT
GCCCACTTTG CAGCTCTTGA ACAATCACTG ATAACAGCTC CCCCTCTTAG CGCACTAGAA
CACTGGCTAC CCATTTTTTT GCCCGTACTA ACCGTCATTT TAGCTTGGTT TCTGTTTATT
AAAGGCATGT TCACGCCTAA TAGTCAGCCG AGTCAACCCT CAGTAGGCGC TAAGCAGCAA
CTACAGCGCT TTTTACATTC AGGCTGGGCT TTCGATAGTC TTTATCACCT TATATTAGTT
AAGCCTTTCA GACTCATCAG TGCATATAAC CGCAGAGATA TTGTCGATCA GCTTTATCGG
CAACTTGAGC GTTTAAGCTC GCTCCTCTAT CGGCAACTTA ACCGCTTTCA AACAGGGCAA
CTACGGCACT ATAGCGCCAG CTTAGTGATT TTTTGCGTCT TGGCCATCGC TTGGGGGCTA
ACACAATGA
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| Protein sequence | MDILLSLIPL LPLLSACLLL FWQPKVATTQ VIGVGSVSLA ALLAVSLNIA LWDQTQFVLQ
TSLGQWLTID KLSLSFTLYL DPLSLVMITI ITCIGALIHL YSASYMKEDA DICRFFVYLN
LFVSAMLFLV LADNLILLYL GWEGVGLCSY LLIGFWYREV KNSQAANKAF IITRIGDTAM
LIGIILIFYQ FDTLNIQQIQ AHSQQLLQNS ELLTKGAVGL TSLCCLLLFA GAAGKSAQVP
LHSWLPDAMA GPTPVSALIH AATMVTAGIY LVARNIELFS LAPDVLHFIA IVGVITLILG
ATSALAQTDL KRILAYSTIS QLGYMFLALG VGSASAAVFH LMTHAFFKAL LFLSAGALIY
CMHHEKNIFK MGGLRKSQPL LALSFGIGCA ALASLPMTSG FFSKELILER TLFAQQPILW
WGGVVGAFFT ALYSAKLFFV IFFGKLSRPS THNTPRAMAA VLIALMLLSL IGGIQPQGVF
AHFAALEQSL ITAPPLSALE HWLPIFLPVL TVILAWFLFI KGMFTPNSQP SQPSVGAKQQ
LQRFLHSGWA FDSLYHLILV KPFRLISAYN RRDIVDQLYR QLERLSSLLY RQLNRFQTGQ
LRHYSASLVI FCVLAIAWGL TQ
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