Gene Swoo_2863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2863 
Symbol 
ID6117178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3499197 
End bp3499736 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content50% 
IMG OID641634409 
ProductNADH dehydrogenase (ubiquinone) 24 kDa subunit 
Protein accessionYP_001761233 
Protein GI170727207 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.088948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00474747 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTA GAGAGCAACA AACCATCCCT GTCTCTGTCG TTGACACCGC AGAGATCTCG 
TTGAGCTCAA AAGAGCAACA GGGTATCGAT GAGTTAATCT CCCACTCGCC ACAACTTGCG
GGGATCACGA TTGATGCACT CAAGTTGATA CAGGCTGAGC GTGGCTGGGT AAGTGATGCT
AGTTTGCATG CCCTCTCGCT CTACACTCAG ATCCCAGTTG CCGATCTTGA CAGTGTTGCC
ACCTTCTACA ACCTTATTTT TCGGCAGCCA GTCGGTAAAG TGGTGTTGCA TCCCTGTGAC
GGGATCAGCT GCGACTTAAT GGGGGGGGAG CATATTCGTC AATGCCTGAA GCAGCAACTA
AACATCACGG CAGGGGAAAC CACAACTGAC AATCGTTTTA CCCTGATCCC ACTGCCCTGT
TTAGGCGCCT GTGATAAGGC CCCAGTGATG ATAGCCAACA AACAACTCTT CGAAAATATG
ACAACAGATG AGCTTCCTAA ATTACTCAGC ACACTCAGTA CATTTGGCGA GGTGAGCTGA
 
Protein sequence
MATREQQTIP VSVVDTAEIS LSSKEQQGID ELISHSPQLA GITIDALKLI QAERGWVSDA 
SLHALSLYTQ IPVADLDSVA TFYNLIFRQP VGKVVLHPCD GISCDLMGGE HIRQCLKQQL
NITAGETTTD NRFTLIPLPC LGACDKAPVM IANKQLFENM TTDELPKLLS TLSTFGEVS