| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2862 |
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| Symbol | |
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| ID | 6117177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3497392 |
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| End bp | 3499188 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634408 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_001761232 |
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| Protein GI | 170727206 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.260803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00720367 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATAT TCACTCAGGA GGTATCGGCA ATAAACGGTC AATCTGGCAA CATAAAACAG
ATGTTAACTC TGGAGATGTT ACCTGAACTT AAAAGTTTAT TAAGCGACTC AGTAGAGCAG
CAAATATGCA TCGACGGCAT ACTCACACTC TGGATAGATA AGACACAGTT AATCCCGGCA
CTTAGATTGC TTAAAACCTT GCCCCAGCCC TTTGATCTTT TACTTGATCT CTTCGGCGTC
GATGAACGAT TAAGACTAGA TAAAGACAAG TTACCCGCAC AAGATTTCAC CTTAGTGTAT
CAACTCTGCT CAATTAACCG TAATCAAGAT ATCAGGCTCA AAGTCGCACT GGCAAACGAC
CAAGCTGAGA TCCCTAGCAT TACCGCGTTC TGGCCATCGG CTAACTGGTA TGAGCGTGAA
GCTTGGGATA TGTTTGGTAT CATCTTTAGT GATCATCCCA ACCTCTATCG ACTGCTGCTT
CCTCCCACGT TTAAGGGTCA CCCGCTACGT AAAGAGTTCC CTTGTCGAGC TACTGAAACT
GAAGCCTTTA GCTTAGACGA TGAACGTCTG GCCATTGAGC AGGAAGCGCT CAAATTCGAT
CCCAAACGCT GGGGAATGGA GCAGAGTAAT AAAGACAATG ACTATCTGTT TTTAAATTTA
GGACCTAACC ATCCCAGTGT TCATGGGGTT TTTCGCATCG CCCTGCAACT CGATGGCGAA
CATATCATCA ATTCGGTGCC TGATATTGGC TACCATCATA GGGGGGCTGA AAAAATAGCA
GAGCGCCAGA CATGGCATGG CTTTATTCCC TACACAGATA GAATCGACTA CCTAGGGGGA
GTGATGAATA ACTTTCCCTA TATCTTGGCT ATCGAACAGT TAGCCAATAT ACAAGTCTCC
GAGCGGGTCA AATGTATCCG AGTCATGCTG GCTGAGTGTT TTAGGATCTT AAGCCACATG
TTGTTTTTTG GCACCTTTGC TCAAGATGTT GGTCAACTCT CTCCCATTTT CTACCTGTTT
ATCGACAGAG AAAAGCTGTT CGGGATCATC GAGGCGATAA CGGGAGCACG TATGCACCCA
AGCTGGTTCA GAATTGGTGG GCTTGCTCAA GACCTTCCCA AAGGCTGGGA CACCATGATG
CAGGAGTTTG TCGATGAGTT CCCCAAAAAA CTCGACGAGT ATGAAGTGAT GGTGATGCAA
AACAGCATAC TAAAGCGGCG CTCAATTGGT ATTGGTCAAT ACAACACCCA AGAAGCCTTA
GATTGGAATA TCACCGGCGC AGGTTTACGT GCCACGGGTC TAGAGTGGGA TCTACGTAAA
GCCCGCCCCT ATTCTGGCTA TGAAAATTAT GATTTTGAGG TTCCTACTGG ACACAAAGGT
GATGCCTACG ACAGGTGCCA ACTTAGGGTT GAGGAGATGA GACAGAGTGT CAAGATTATC
CAGCAATGCA TCAACAACAT GCCCGAGGGC GAAGTCAAAG CCGATCACCC ATTAACCACG
CCTCCAAGCC AACGTAGCAA GCATGATATC GAAACCTTAA TTCAGCATTT TCTCAATGTC
AGTTGGGGAC CGGTTATGCC AAAAGGTGAA TCCTGCTTCG CGGTTGAAGC AACCAAAGGG
GTTAACGCCT ACACCATTAT CAGTGATGGC AGCAATACCA GTTATCGCAC TCGTATTCGT
ACCCCCTCTT TTGCTCACTT ACAGATGATA CCTAAAATGG CAAAAGGCTT AATGGTGGCA
GATCTCATTG TGATCTTGGC CAGTATCGAT TTTGTGATGG CTGATGTGGA TAGGTAG
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| Protein sequence | MSIFTQEVSA INGQSGNIKQ MLTLEMLPEL KSLLSDSVEQ QICIDGILTL WIDKTQLIPA
LRLLKTLPQP FDLLLDLFGV DERLRLDKDK LPAQDFTLVY QLCSINRNQD IRLKVALAND
QAEIPSITAF WPSANWYERE AWDMFGIIFS DHPNLYRLLL PPTFKGHPLR KEFPCRATET
EAFSLDDERL AIEQEALKFD PKRWGMEQSN KDNDYLFLNL GPNHPSVHGV FRIALQLDGE
HIINSVPDIG YHHRGAEKIA ERQTWHGFIP YTDRIDYLGG VMNNFPYILA IEQLANIQVS
ERVKCIRVML AECFRILSHM LFFGTFAQDV GQLSPIFYLF IDREKLFGII EAITGARMHP
SWFRIGGLAQ DLPKGWDTMM QEFVDEFPKK LDEYEVMVMQ NSILKRRSIG IGQYNTQEAL
DWNITGAGLR ATGLEWDLRK ARPYSGYENY DFEVPTGHKG DAYDRCQLRV EEMRQSVKII
QQCINNMPEG EVKADHPLTT PPSQRSKHDI ETLIQHFLNV SWGPVMPKGE SCFAVEATKG
VNAYTIISDG SNTSYRTRIR TPSFAHLQMI PKMAKGLMVA DLIVILASID FVMADVDR
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