| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2823 |
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| Symbol | |
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| ID | 6117138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3450417 |
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| End bp | 3451418 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641634369 |
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| Product | hydroxyproline-2-epimerase |
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| Protein accession | YP_001761193 |
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| Protein GI | 170727167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.252045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.582579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAG GCACCTTCTT TTGCGTCGAT GCTCATACCT GCGGCAATCC GGTTCGTTTG
GTCACCAGTG GCCACCCGGA CCTTAAGGGC TGCACCATGA GCGAGAAACG CCAGGATTTT
CTCAATCACT ATGATTGGAT CCGTAAAGCC CTGATGTTTG AACCCAGAGG CCACGATATG
ATGTCGGGGG CTTTTTTATA CCCTCCCTGT AGTGATAACG CCGACGCGTC GATTCTTTTT
ATAGAAACCA GTGGCTGCCT GCCCATGTGT GGTCATGGGA CTATCGGAAC CGTCACCGCT
GCAATTGAGT CTGGGCTGCT AACGGCCAAA AAACCTGGGA AACTGGTAAT AGATGTACCA
GCAGGTCAGA TAAACATTGA TTTTCAACAA ACTGGAGACA AGGTCGACTG GGTAAAAATC
TACAACGTGC CCGCTTACCT TGCCCATAGT GATGTTATTC TCGATATACC TGAATTAGGC
CCATTAAAGG TCGACGTGTC ATATGGTGGA AACTACTACG TCATCGTCGA ACCTCAAACC
AACTACCCAG GCTTAAGGCA TTGGTCTGCC GCCGACATCT TGCGCTGGAG CCCAATGATA
AGGCAGATAG CTCACGAACA ATTAAGCTGT ATACATCCAG ATGACCCAAC GGTATCAGGA
GTTTCACATG TATTGTGGAC AGGCGATACC ATCAGCGAAG GATCTGACGG TGCCAATGCA
GTATTTTACG GTGATAAAGC TATCGACCGT TCACCTTGCG GGACAGGAAC AAGTGCTCGG
TTAGCGCAAC TTTACACTAA AGGGCAGCTC AAGGTTGGCG ATCAATATAC CCACGAGAGC
ATTATTGGTA GCCAATTTAT TGGCCGCATT GAGTCAGCCA CTCAAGTTGG CACTCACCCC
GCCATTATGC CAAGTATTCA AGGTTGGGCG CGCATTACAG GTAAAAACAC CATCACAGTC
GATGATAGCG ATCCCTACGC GTTTGGTTTT CAAGTGATTT AG
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| Protein sequence | MLKGTFFCVD AHTCGNPVRL VTSGHPDLKG CTMSEKRQDF LNHYDWIRKA LMFEPRGHDM
MSGAFLYPPC SDNADASILF IETSGCLPMC GHGTIGTVTA AIESGLLTAK KPGKLVIDVP
AGQINIDFQQ TGDKVDWVKI YNVPAYLAHS DVILDIPELG PLKVDVSYGG NYYVIVEPQT
NYPGLRHWSA ADILRWSPMI RQIAHEQLSC IHPDDPTVSG VSHVLWTGDT ISEGSDGANA
VFYGDKAIDR SPCGTGTSAR LAQLYTKGQL KVGDQYTHES IIGSQFIGRI ESATQVGTHP
AIMPSIQGWA RITGKNTITV DDSDPYAFGF QVI
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