| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2816 |
|---|
| Symbol | |
|---|
| ID | 6117131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3443621 |
|---|
| End bp | 3444946 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641634362 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_001761186 |
|---|
| Protein GI | 170727160 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000333195 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.738801 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCA CAATGTATCA AAACCGTAGA ACAAGACTAT TTAATGCACT TCCCAATAAA
AGCTTTGTCA TTATTAGCGG ATACCAACAA AAAGTAAGAA GCAAAAATAT AAAGTACCAT
TTCAGGCAGG ATAATGACTT CTTATACTTA ACAGGTTTTA ACGAACCAGA TGCTGTCGCA
CTATTATACT GTGATGAAAG TAAGGATACA GGATATTCGT ATACCTTACT TTGCCGGCCT
AAAGATGAAG CCCAAGAGGT GAGTTTTGGC GCACGTGCAG GTGTACTCGG TGCCCTTAGT
CAGTATGGGG CTGATGATGC TTTTGATATT GCAGAGCTTG AACAAGTTCT ACTCTCTAAA
TTAACCGATC ACGCGAACTT ATTTATCAGT GATGAACTCG GCCGCTTCTC AAGCCAAGTT
ATTGGCTGGT TAAATCATCA AAGACTGAAC TGTAGTTTTG ATACCATCAA GCAGCACCGC
ACACTCACAC CGTTAGCAAA AGTGCTCCAC CCAATGAGAG TCATTAAGAG TAGTCATGAA
ATTGATAAGA TAAAAGCTGC AGTACACGCT TCCACTGCTG GGCATATCGC GGTTATGCGG
GCCTGTAAGC CTGGTGTGAA TGAAGGGCTG CTCTCAGCAA GCTTCAATTT TGCAATCTCT
CAATATGGCT GCAGCGAGGT TGCTTACCCA AATATTGTCG CTTCAGGTAA CAATGCCTGC
TGCTTACATT ATGAAGAAAA CTGCTGCAAC TTGGCCGACG GTCAGATGTT ACTGATTGAC
GCAGGTGGAG AGCTTGAGCA CTACGCCTCT GATATCACCC GCACCTACCC AGTTAATGGT
AAGTTCAACG AAGCTCAAAG GGACATCTAT CAGTTGGTAT TAAACGCATT AGATGCCGCC
ATAGATAAAG TTAAGCCAGG CGCCAACTGG AACAGCCTCT ATGAAACCTG CATGGAAGTC
ATGGCTAAAG GCCTATTAGA GTTGGGTTTA CTCAGCGGTA ATATTGATGA CATCATGAAA
GATGAAAGTT ATAAGCGATT CACGGTGCAT AAAACCGGTC ACTGGTTAGG GATGGATGTC
CACGATGTTG GGCCATACCA CGATGAAAAT GGACAATGGC GCAAGCTTGA ATCTGGAATG
GTATTTACCA TAGAGCCAGG GATCTACATT CCACTTTCAG CAACTGACAT ACCAGAAAAG
TATCGCGGTA TGGGGATCAG AATAGAGGAC GACATTCTTG TGACACAAAA TGGCTTTGAA
AACCTCTCTG CGGGCGTGCC ACGAACAATC GGTGAGATCG AGTCAATCAT GTCACCAATT
GACTGA
|
|---|
| Protein sequence | MISTMYQNRR TRLFNALPNK SFVIISGYQQ KVRSKNIKYH FRQDNDFLYL TGFNEPDAVA
LLYCDESKDT GYSYTLLCRP KDEAQEVSFG ARAGVLGALS QYGADDAFDI AELEQVLLSK
LTDHANLFIS DELGRFSSQV IGWLNHQRLN CSFDTIKQHR TLTPLAKVLH PMRVIKSSHE
IDKIKAAVHA STAGHIAVMR ACKPGVNEGL LSASFNFAIS QYGCSEVAYP NIVASGNNAC
CLHYEENCCN LADGQMLLID AGGELEHYAS DITRTYPVNG KFNEAQRDIY QLVLNALDAA
IDKVKPGANW NSLYETCMEV MAKGLLELGL LSGNIDDIMK DESYKRFTVH KTGHWLGMDV
HDVGPYHDEN GQWRKLESGM VFTIEPGIYI PLSATDIPEK YRGMGIRIED DILVTQNGFE
NLSAGVPRTI GEIESIMSPI D
|
|---|
| |