Gene Swoo_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2804 
Symbol 
ID6117113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3424013 
End bp3424687 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID641634344 
Producttwo component transcriptional regulator 
Protein accessionYP_001761174 
Protein GI170727148 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000183823 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTT TGGTTGTTGA AGATGACCCA ATCCTTTCCC ATCACCTCAA GGTACAATTA 
AGTGAGTTAG GTAATCAGGT TCAAGTCGCA TTAACGGCTA AAGAGGGATT TTATCAAGCA
ACCAACTACC CCATCGATGT CGCAATCGTC GACTTAGGCC TACCGGATCA AGATGGGATC
AGTTTAATTC AAAGTTTGCG GGATAACGGC CTAAAAGCAC CGGTACTTAT CTTAACAGCT
AGAGTCAACT GGCAAGATAA AGTTGAAGGC CTCAATGCTG GTGCCGATGA CTACTTAGTT
AAGCCTTTTC AAAAAGAGGA GTTGGTGGCC AGGCTCGATG CCTTGGTCAG ACGCAGTGCC
GGTTTCGTAA AACCTGTGAT CACCAGTGGC CCACTGAATT TAGACTTAGC TGCTAAACAG
GTCACCATGC ATGAAGAGGT GATGGAGGTG ACCGCATTTG AATATCAAAT TCTAGAATAC
CTGATGCGTC ATTGCCATGA AGTGGTTGCT AAACAGAGAC TATTAGATGT TGTTTATGCC
GACAAAGAGG GCGATCCCAA TACTATTGAG GTGATGGTTT CACGGCTAAG AAAGAAACTG
ACCAGTGGCG GACTGGATAA CCCTATCGCA ACCATACGTG GCCAAGGCTA CAAGTTTAAC
CTGCCATGCA GTTAA
 
Protein sequence
MRILVVEDDP ILSHHLKVQL SELGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI 
SLIQSLRDNG LKAPVLILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPVITSG PLNLDLAAKQ VTMHEEVMEV TAFEYQILEY LMRHCHEVVA KQRLLDVVYA
DKEGDPNTIE VMVSRLRKKL TSGGLDNPIA TIRGQGYKFN LPCS