Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2803 |
Symbol | |
ID | 6117112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3422921 |
End bp | 3423775 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634343 |
Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
Protein accession | YP_001761173 |
Protein GI | 170727147 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00271338 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.782993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTGT TCAAAATGGC TGCTTTGGTG GCATTAAGTT CGATATCTTC GAGTGTATTT GCGGCCGTTT TCACTTTTAC CGCCATTCCA GATGAAAATG AAAGCCAACT TCGCACACGT TTTGAGAAGG TCGCCGTCTA CCTTGAAAAA GAGCTAGGTG TTGAGGTGAA GTATGTACCG GTAAAATCTT ACTCTGCAGC GGTGACAGCT TTTAGAAACA ATCAGGTACA ACTCGCATGG TTTGGCGGGT TATCTGGTGT TCAAGCTCGT CGACTGGTGC CTGGTTCTGA AGCGATAGCC CAGGGAAATG AAGATCAGTT TTTTCAAAGT TATTTTATTG CCAATAATTC AGCGCAGATC ATCCCGTCTG ACAATTTTCC TAACTTAAAT GGGGTGACTT TTACCTTTGG TTCAAAGGGT TCTACATCGG GTCGATTGAT GCCAGAGTTT TTTATTGAAA GAAACTTAGG TAAGAAAGCA AAAGATGTGT TTAAGCGCAT AGGTTTCTCA GGCGATCACA GTCGTACCAT TACCCAAGTC GAGTCGGGTG CTTATCAAGT GGGAGCCCTA AATTATAAGG TTTGGGAAAC CGCGGTAGAA AACGGCACTG TTGATGTGAA TAAAGTGAAG GTTATCTGGC AAAGCCCTAC TTATCCTGAT TACCAATGGA CGGTTAGGGA AGGGGTTGAT AGCGCATTTG GAGATGGATT TAAGCAGCGC TTAACTCAGG CGTTACTGGA TATGGACGAT CCTGAGCTAT TGGCCAGTTT CCCACGAAAA TCTTTTGTAC CCGCAGATAA CTTAGATTAT GAGCCTATTG AGAAGGTCGC TAAAGCGATA GGGCTAATCG ATTAG
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Protein sequence | MGLFKMAALV ALSSISSSVF AAVFTFTAIP DENESQLRTR FEKVAVYLEK ELGVEVKYVP VKSYSAAVTA FRNNQVQLAW FGGLSGVQAR RLVPGSEAIA QGNEDQFFQS YFIANNSAQI IPSDNFPNLN GVTFTFGSKG STSGRLMPEF FIERNLGKKA KDVFKRIGFS GDHSRTITQV ESGAYQVGAL NYKVWETAVE NGTVDVNKVK VIWQSPTYPD YQWTVREGVD SAFGDGFKQR LTQALLDMDD PELLASFPRK SFVPADNLDY EPIEKVAKAI GLID
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