| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2798 |
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| Symbol | |
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| ID | 6117107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3417572 |
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| End bp | 3419182 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634338 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001761168 |
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| Protein GI | 170727142 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATAA AACGCTACCT GTTTTTACTG TTTGGTGCCT TGATCATCTT GCTAGGTTTG
AGCCAGCTTT TGATCTCTCA ATATTATAAA GGGGAGCTTC AAAATGAGCT GAGTGAAAGT
TCCAAAGCGC TATCTCAAAA CCTTGTAAAG GTGCTGATAG ATAATGTGGG CAGCGAGCAG
GAGTTTATTT TAGGTCTTGA TGAAGTCGAG ATACAGGAAA CGATTGTCGA CATTGAAGAG
GCGGAAGTCG ATTTTAAGCA CGATATAGAG GAGATGACGC GAGAGGTTGA TCAGCTGGCC
GAAGAGATCG CCTTATTGGA TAAGCCAGAA TATGGTGAGC TGGATCAGAA AGAGCGTGAG
GCGTTCCAAG CGCTATTAAG CGAGAAAGAG AAAGAGCTTA AGCTGCATTT AAAAGAGATG
GCTCGACATG AACGTGATAT GAGCAGGGAG CAAAGGATAA ATATTGCAGA GGCGCGCAGA
GAAGCTGCAA TGGCATACCG CGAGCGATTA CATCAAGCTG TCAGTCAGAT TGAGATTGAT
GCTGGCTCTT GGTTGAAAGA TGGCAATGTG GTGATTGTTG AGCCGCCAGC TCCTCCCGTA
TTTGGGGATT TTGATCTGCA GTATTCTCAT GATATTCGCG TGCCAAGTCA TGGTACTAAC
GATCAACTTG AACGCTTTAG TGAGTCGATG TTAGCTCTGA TCTTACTGAC CTCTTTTGGG
GCTCTTCTTA TGGCTTACTT GTTGAGTCAC TATATCAGCT CACCTTTGAC TAAATTGGCA
AAGGGGCATC AGAAACTGGG GGAGGGAGAT TTAGGCTTCC AAGTTGAGGA GAAAGGGGTT
AAAGAGCTTA AAGCGATATT AACTGGCTTT AATAAAATGA GCCGTAAGTT GGAGAAGCTG
AGTGAGAAAG AGAGCCGCAT GGCCCAGCAG GAGCAATTAG CTGAACTTGG AGAGGTAACA
CGAGGGATAG CGCATAGCTT ACGTAATCCT CTGCATACGA TAGGCCTGCT TTCTGAAAGT
GCTATTCAGG CTGACAATTC GGCAGAGGCG GCTCAACAGC TTAAGAAGAT CCAGCATAAA
ATTGCCATGA TGGATAAGAG TATTCAATCA CTGCTTACGC TTTCGAGTAA TGAAGTTGAC
CGCTCAACCT CTGTACCGTT ACAGGCGATT ATTCACGATA TCTTGTTAGA GCTTTCAATT
ACAGGCTCTA GACCTAAAAT CAGTTTTAGT GAAAGTGACA AACACTATAA CGTGCCGGGG
GCCGAGTCTG AGCTAAGAAG CATATTGCAT GGCGTGATTA TTAATGCGGT AGAGGCTACT
CCTGACGATG GAGAGGTCAG TGTGTCGTTA GATGAAACGA GCCGTGCTTA TCATGTCATA
GTTAAAGACA CGGGCTGTGG AATTTTACCT GAAGTAAGAG AGCGCATTTG TCAGCCTCAT
GTGACGACTA AAACCGAAGG AACGGGAATG GGAGCATATA TCGCAGAGCG ACTGCTTAAT
GGGCATTATG GTGGAGAGCT TATGTTTGCT GATAATCCTG GTGGGGGCAC TGTTGTGACG
ATAAGTTTTG CTCGTACAGA TAACAATAAT AAAAGAGGTG ATGAAGAATA A
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| Protein sequence | MSIKRYLFLL FGALIILLGL SQLLISQYYK GELQNELSES SKALSQNLVK VLIDNVGSEQ
EFILGLDEVE IQETIVDIEE AEVDFKHDIE EMTREVDQLA EEIALLDKPE YGELDQKERE
AFQALLSEKE KELKLHLKEM ARHERDMSRE QRINIAEARR EAAMAYRERL HQAVSQIEID
AGSWLKDGNV VIVEPPAPPV FGDFDLQYSH DIRVPSHGTN DQLERFSESM LALILLTSFG
ALLMAYLLSH YISSPLTKLA KGHQKLGEGD LGFQVEEKGV KELKAILTGF NKMSRKLEKL
SEKESRMAQQ EQLAELGEVT RGIAHSLRNP LHTIGLLSES AIQADNSAEA AQQLKKIQHK
IAMMDKSIQS LLTLSSNEVD RSTSVPLQAI IHDILLELSI TGSRPKISFS ESDKHYNVPG
AESELRSILH GVIINAVEAT PDDGEVSVSL DETSRAYHVI VKDTGCGILP EVRERICQPH
VTTKTEGTGM GAYIAERLLN GHYGGELMFA DNPGGGTVVT ISFARTDNNN KRGDEE
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