Gene Swoo_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2784 
Symbol 
ID6117092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3399235 
End bp3400116 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content44% 
IMG OID641634324 
Producthypothetical protein 
Protein accessionYP_001761155 
Protein GI170727129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.215341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTT TTGTTAGAGA TTTAACCGTG ATTGACTTTT CTTATCTGTG TCCCATTCGT 
GGCATGGTGG GAGAGAGCTG GATTGTCGAT GTATTACTCG ATGGCGGTTT AGATGAACAA
AATATGGTGC TCGACTTCTC AAAAGTGAAG CGCACAATTA AAGACACCAT TGATAATGTC
GCCGATCACC GATTGCTGAT CCCTACAGCT TGCAGCGAAG TTCGCTGGCA ACAGCAGGGC
GACAGAGTAT GGATGGATTT TAATAGCCTT AAAGGGGATA TACATCTGGC CTGCCCTGAG
CAAGCTTTTG CGCTTATTCC TAGTGAGCTT ATCGATTTTG AAAGTGTGAA TACCTTTTTG
CAAAAAGCCT TAAAAGAGGT GTTACCCGAT AACGTTGATG GCATTGCGTT AACCCTCAGA
AATGAGCTTC ATGAGACGCC TTTTTATCAT TACTCCCACG GTTTGAAGAA GCATGATGGA
AACTGTCAGC GTATCGCCCA TGGTCACCGT AGCCCGATAA ATATTTTTGA GAATGGGATC
TCGGCACCAA AATGGGATGA ATATTGGGCT GAACGTTGGA AAGATATCTA CCTTGGCACT
GTAGAAGATG TGGTTAAGAT TGATGAGTTA ACGCTTTCAC CTCAGGCGAA GGTGAGTGAT
GACACTCATT TTGGCTTTCA CTATCAAGCC CCACAAGGTG ATTTTCAACT GGCGATGCCT
AAACCCATGT GTGAGATTAT TCCCCACGAT ACAACGGTCG AGCTGTTGGC TGAGTTTGTA
GCCAATACAT TAGTTGAAAA GTCACCTCAC AGTCAGTTTA AAGTCATCGC CTACGAAGGT
GTAGGTAAAG GCGCGATATC GGTTAAAGGT CATCAAGCAT AG
 
Protein sequence
MQLFVRDLTV IDFSYLCPIR GMVGESWIVD VLLDGGLDEQ NMVLDFSKVK RTIKDTIDNV 
ADHRLLIPTA CSEVRWQQQG DRVWMDFNSL KGDIHLACPE QAFALIPSEL IDFESVNTFL
QKALKEVLPD NVDGIALTLR NELHETPFYH YSHGLKKHDG NCQRIAHGHR SPINIFENGI
SAPKWDEYWA ERWKDIYLGT VEDVVKIDEL TLSPQAKVSD DTHFGFHYQA PQGDFQLAMP
KPMCEIIPHD TTVELLAEFV ANTLVEKSPH SQFKVIAYEG VGKGAISVKG HQA