| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2783 |
|---|
| Symbol | |
|---|
| ID | 6117091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3398346 |
|---|
| End bp | 3399206 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641634323 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001761154 |
|---|
| Protein GI | 170727128 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0392125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAATATA TTAGCACCCC ATCTGTTTTG TCTTCTGCTG TGTTCTGCTG CATGGTGATA
AGTAGTTTAC TGATATCAAG CCATGCATCA GCTCAAGTTG AGCTGGTGGG TAAGATGGAG
CAGGGGGCGT TAATTCGTGC TCAGGTTGAA CCGGGAACAA AAGTTTCACT CAATGGGGAA
GCGGTTAAAG TTACCCCAAA AGGTGATTTT GCTTTCGGCT TTGGCCGTGA AGCTGAACTC
AATCAAGAGC TAAAACTGGT TTATCCTGAT GGTTTAACTC AAATAATGCC ACTTACTATT
AGTGAAAAAG AGTACAAGAT TGATAGGGTA AATGGGATCA GTAAAAAGAT CATGAAACCA
GATCCTAAAG CGGTGGAGCG CTCTAGAAAA GACAGTAAGC AGGTCAAAGC CGCCCGTGCA
CAATTTTCAG AGCAAAATGC TTTTACTCAA GATTTTATCT GGCCTCTCAC AGGTAGAATT
TCTGGCGTAT ATGGCAGTCA ACGTGTCTAT AACGGCAAAC CTGGAAATCC TCATTATGGC
GTCGATGTTG CTGCTAAAAC AGGAACCGTT GTGGTCGCTC CCGCCGATGG CATTATCAGT
TTATCAGTAG CGGATATGTT CTACTCAGGT GGCACGGTTA TTCTCGACCA TGGCTATGGT
GTCAGCTCTA GTTTTCTTCA CTTAAGCAAA CTGTATGTCA CAGAGGGCGA GGCGATAAAG
CAGGGGCAAC CCATCGCAGA AGTCGGTGCC ACAGGACGAG TAACTGGTCC TCATCTTGAT
TGGCGGGTCA ACTGGTATCA GATGCGATTA GATCCCGTAA CCATAGTGCC ATCCATGGCG
AGTGTGCTTA ATAAAAAGTA G
|
|---|
| Protein sequence | MKYISTPSVL SSAVFCCMVI SSLLISSHAS AQVELVGKME QGALIRAQVE PGTKVSLNGE
AVKVTPKGDF AFGFGREAEL NQELKLVYPD GLTQIMPLTI SEKEYKIDRV NGISKKIMKP
DPKAVERSRK DSKQVKAARA QFSEQNAFTQ DFIWPLTGRI SGVYGSQRVY NGKPGNPHYG
VDVAAKTGTV VVAPADGIIS LSVADMFYSG GTVILDHGYG VSSSFLHLSK LYVTEGEAIK
QGQPIAEVGA TGRVTGPHLD WRVNWYQMRL DPVTIVPSMA SVLNKK
|
|---|
| |