| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2779 |
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| Symbol | |
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| ID | 6117087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3395170 |
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| End bp | 3395910 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634319 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_001761150 |
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| Protein GI | 170727124 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.960019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAT TACATCCTAA AGGGCCGCTT CTGTCCTCAT TTGTTGAAGG ATCTTTGCCT
GCTTCGCTTT CAGTCGTGAT TGCTAGCCAT ATTGAGATGT GTCCTGAGTG CCAAAAGCAG
GTTGAACTCC TGACAGAACA AGCTGCGAAT GCTTGTTTTG GTGAAAGTTC AACCTCAGCT
ACACAGTCAG GCTTAGGGCC ACAAGTGGAG AGGCTTTGCG AAGAGTTAAT GGATTCTGAC
ATTGAAGCAT CACTCAGTGG CAGTGAATTG TCTATGTTGG ATGCGATAAC GTCCATTACC
GAGGTTGAGC ACAGTGCAGA AACTGTGGAT TTGGCGGCCA TTATAGATAA AGAAATTGAG
GTTTCTGGTG CTAAATTTAA AGTGCCAAGG GCGTTAAGAA ACATTGAGAT AAAACCGTTT
CAGGGCTTGG GCAAACTTTC TCGCTCTCGT TTGAATATTG AAGATGGCGA CTTAAGAACC
AGCCTGCTGC ATATCGATAA AGGAGGCAGT GTCCCGACCC ATACTCATAA AGGGTTTGAA
GTGACTTTGT TACTGCAGGG CAGCTTTGAA GATGAGATGG GGGTTTATCA AGCGGGAGAC
TTTATTTGGC TTGATGCTGA GCACACTCAC CAACCAGTGA CTAAAACAGG TTGCGTGTGC
CTCACTGTTT CAAATGACGC GATTCACTTT ACCAAAGGGG TCAGTCAGTT ACTTAACCCT
ATTGGTCAGT TCATCTATTA G
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| Protein sequence | MIKLHPKGPL LSSFVEGSLP ASLSVVIASH IEMCPECQKQ VELLTEQAAN ACFGESSTSA
TQSGLGPQVE RLCEELMDSD IEASLSGSEL SMLDAITSIT EVEHSAETVD LAAIIDKEIE
VSGAKFKVPR ALRNIEIKPF QGLGKLSRSR LNIEDGDLRT SLLHIDKGGS VPTHTHKGFE
VTLLLQGSFE DEMGVYQAGD FIWLDAEHTH QPVTKTGCVC LTVSNDAIHF TKGVSQLLNP
IGQFIY
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