Gene Swoo_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2774 
Symbol 
ID6117082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3390372 
End bp3391625 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content42% 
IMG OID641634314 
Productamine oxidase 
Protein accessionYP_001761145 
Protein GI170727119 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.858792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.589984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTGCCGTTAT TGGTTCTGGA ATATCGGGAC TAACCAGTGC TTACCTTTTA 
GATAAAAGCC ATAAAATCAC TGTATTTGAA AAGAATGATT ATGTTGGTGG GCACACCGCG
ACCGTCGATA TAGAGCATAG TGGTAAAAAC TACGCCATAG ATACTGGTTT TATCGTATTT
AATGATAGAA CTTATCCGCG TTTTAATAAG CTGTTACGCC GTTTAGGTGT TGAAAGACAA
GAGACTGAGA TGAGCTTTAG TGTGCATGAC AGAAGCACAG GTTTTGAGTA TAACGGCCAT
GGTATCAACT CACTATTTGC CCAGCGCCGA AACATCTTCA GACCTAGATT CTGGCGATTA
ATTGCCGATA TCATCAAATT CAATAATCGT TGCAGGGCAC TGCATGAATC AGACTCTATT
CCACAAGGAC TTACACTCGG TGAGTTCTTA GCTGAACAGC AATTTTCCAC CACTTTTAGC
CAGCACTACA TCTTACCAAT GGGGGCGGCA ATTTGGTCAA CAAGTTTGGC AAAGATGCAG
ACCTTCGAGC TTTCCTTCTT TATTCAATTT TTTTATCACC ATGGCTTGCT AAATATTGTC
GATAGACCCC AATGGTATGT GGTGCCTAGC GGTTCTCGCT CCTATGTCGA CAAGTTAACT
GAGCAGTTAA CGCAGCCAGT TGTGCTTAAC GCTAACCTCA TTGGAGTGAC TCGTAAAGAG
GAGCGGGTAC AGCTCTATTT TAATGACGGG CGAGTGGAGG TGTTTGATGA AGTGATTTTT
AGCTGTCATT CAGATCAAGC ACTGTCACTA CTGATGGACC CATCTGAGAA AGAGACTCAG
GTGTTATCAG GGATACCTTA TCAGAGTAAT GAAGTAGTAC TGCACACCGA TGAGTCTTTA
TTGCCTAAAC GAAAGCTGGC ATGGGCAAGC TGGAACTATA TGCTTGATGG TCAAAAAGAC
TCTTTAGCTA ATGTGACCTA CAACATGAAT ATATTGCAGG GAATTGAATC GAAAAGTGCA
TTTTGTGTGA CCTTAAATCA AACCGCTTAC ATTAACCCAG AGAAGATTCT TAGACGCTTT
GAATATGATC ATCCGGTGCT AGACAGCAAT ACGGTTAACG CTCAAAAGCG AAGAAGAGAG
ATCTGCGGTA AGCATAATAC CCATTTTGTT GGTGCATATT GGTATAACGG TTTCCATGAA
GACGGCGTTC ACAGTGCGGT AGACGTGACT GAACGTTTTG GACTTACTTT ATGA
 
Protein sequence
MKNIAVIGSG ISGLTSAYLL DKSHKITVFE KNDYVGGHTA TVDIEHSGKN YAIDTGFIVF 
NDRTYPRFNK LLRRLGVERQ ETEMSFSVHD RSTGFEYNGH GINSLFAQRR NIFRPRFWRL
IADIIKFNNR CRALHESDSI PQGLTLGEFL AEQQFSTTFS QHYILPMGAA IWSTSLAKMQ
TFELSFFIQF FYHHGLLNIV DRPQWYVVPS GSRSYVDKLT EQLTQPVVLN ANLIGVTRKE
ERVQLYFNDG RVEVFDEVIF SCHSDQALSL LMDPSEKETQ VLSGIPYQSN EVVLHTDESL
LPKRKLAWAS WNYMLDGQKD SLANVTYNMN ILQGIESKSA FCVTLNQTAY INPEKILRRF
EYDHPVLDSN TVNAQKRRRE ICGKHNTHFV GAYWYNGFHE DGVHSAVDVT ERFGLTL