| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2765 |
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| Symbol | |
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| ID | 6117073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3383037 |
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| End bp | 3384548 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634305 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001761136 |
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| Protein GI | 170727110 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.256574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.220572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAG CTAAATTTGT TCAAGGTTCG ATAATGCGTC ACATCTTAGT GATGAGTTCG
ACTTCAGCGG TGGGGATATC CGCGCTATTT GTGGTCGATT TAATCGATAT TTTCTTCTTG
AGCTTACTCG GTGAGCAGGA GCTTGCTGCT GCGGTCGGTT ATGCCGGAAC TATCTCTTTC
TTTACCACCT CCATAGGTAT TGGTTTATCC ATAGCACTTG GTGCACTGGT ATCCCGTGCT
ATCGGTGCCA AACAGATGGA GGCAGCTAAG CGCTTACTAC TCAATTGCGC CGTTGTGACA
CTCTTGATGT CACTGTTAGT CTCGGCTGTG GTGACCTATT TTATTCCAGA ATTGCTCTCT
TTAGTTGGAG CGACAGGACA TACCGCAGAG CTTGCTGCTG GCTATCTCTA TATCTTAGTG
CCCTCACTGC CACTTATCTG CCTTGCTATG GCACTGGGCG CTGCACTTCG AGCTGTGGGA
GATGCCAAGC TCTCTATGAT GTCAACGCTT GGTGGTGGAG GGATCAATTT GGTGTTTGAT
CCCATCTTTA TCTTTGCATT GGGGATGGGG ATAGAGGGGG CGGCGGTTGC TTCTGTCTTG
GCTAGGGCGG GGGTGCTGTT TATCGCTGCG CGCGGTGTTA TCGTCAAGCA CAAACTGTTT
GGGCAGTTTG ATTTTGGGAG TTTTAAGACA GATCTTAGCG CTATTTTCGC AATTGCAGCG
CCGGCCATGC TAACCAATAT CGCCACGCCC ATAGGTAATG CTGTAGTGAC CCGAGCGATT
GCAGATTTTG GTGATGGCTA TGTTGCTGGC TGGGCGGTAT TAGGGCGTTT AGTTCCTGTC
TGCTTTGGAA TGATATTCGC TTTATCGGGA GCCGTTGGCC CTATTGTAGG ACAGAATTAT
GGTGCTCATG AATTTGATCG AGTGAGAGAG AGCTTAACCA AAGCCCTGCA GTTTTGTGCC
ATGTACGTTG TTGGCGTCTC TTTGATCTTA ATGCTGTTAC AGGATCAGAT TATCTCTGTA
TTTGATATGC AGGGAGACAG TGCGGAAATT ATTCGGTTCT TTTGTACTTA TATTGCCGTT
TTCTTTGTTT TTTCTGGTGC GTTATTTGTG GCTAATGCCT CTTTTAATAA TCTAGGTAAA
GCAAAGTACT CCACCTTTTT TAATGTGGGT AAAGCGACCA TAGGTACTAT CCCATTTGTC
TATTTTGGCG CTCAGTGGGG AGGGGTTTAT GGTGTGTTGG TGGGGCAAGT TATCGGGGCG
ATAATTTTCG CAATATTAGG TGTTTATACT GCTTTTCGAT TAGTGGACAA GGTAAGAGCT
GATGCATCGA AAGAGCTCGC ATCCACTGTG AGTGATGAGC AAGATGAGTT TGATACCGAG
TTAAGCCCGA GTAGTACTAA TGCATTATCG TCCTCATGTG CGCTGATGGC GCAGATAACA
GAGGAGCAAG ATGCAGAAGC TGGGAGCGAA GTGAGAGAGT TTATAAAGCC GACAGGTGAT
AAAGCCAGTT GA
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| Protein sequence | MTTAKFVQGS IMRHILVMSS TSAVGISALF VVDLIDIFFL SLLGEQELAA AVGYAGTISF
FTTSIGIGLS IALGALVSRA IGAKQMEAAK RLLLNCAVVT LLMSLLVSAV VTYFIPELLS
LVGATGHTAE LAAGYLYILV PSLPLICLAM ALGAALRAVG DAKLSMMSTL GGGGINLVFD
PIFIFALGMG IEGAAVASVL ARAGVLFIAA RGVIVKHKLF GQFDFGSFKT DLSAIFAIAA
PAMLTNIATP IGNAVVTRAI ADFGDGYVAG WAVLGRLVPV CFGMIFALSG AVGPIVGQNY
GAHEFDRVRE SLTKALQFCA MYVVGVSLIL MLLQDQIISV FDMQGDSAEI IRFFCTYIAV
FFVFSGALFV ANASFNNLGK AKYSTFFNVG KATIGTIPFV YFGAQWGGVY GVLVGQVIGA
IIFAILGVYT AFRLVDKVRA DASKELASTV SDEQDEFDTE LSPSSTNALS SSCALMAQIT
EEQDAEAGSE VREFIKPTGD KAS
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