| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2757 |
|---|
| Symbol | |
|---|
| ID | 6117065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3375847 |
|---|
| End bp | 3378921 |
|---|
| Gene Length | 3075 bp |
|---|
| Protein Length | 1024 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641634297 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001761128 |
|---|
| Protein GI | 170727102 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0520624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTA AACCCAAAAA AGCGATAAAT TTAAAACAAA TCTATCGTCA ACTCCCCCGT
TACCAAAAAC TTTTAGTTCT GGTATTAGCA CTCTACTTAT CATTCGTTAC CTTGCTTGGC
CTACTTATCC CTTCGATAGC CGAGCAGCAG CTTCCTATTC AGCTAAGCGA GACATTAAAA
CGACCCGTTA GCTTAAAAGA TGTTTCAATC AACCCCTTTA ATCTTCATGT ATCACTCACA
GAGCTGCACA TTTTCGAAGA GGACAACACC AAGTTTACTG GCTTTGCTGC ACTCAATTTC
GAACTAAGCT TTTGGCACTC ACTGATAAAT GGCGCCATAA GCATCAAAGA TGTGACATTA
ACAGGCCCTT ACCTGCTCGC TGAACGTTTA AGCCAGACTG AGGGGGCTGA ATTTAACTTC
TCTGATATCA TCACTGAGAT GACTAACACC ACAACAAGCG CACCCAGCGA AGAGAATCCC
GCAACACTTC CCCATATCAT GGTGGAGAGA TTAGCGATTG TCAGTGGAAA CCTTAACTTT
ATAGATACCC TTACTGATAG CCAGTTAAGT TACCCAGATA TTAACCTTGA TATCAAGGGG
TTCGATACAT TAACTGAGAT AAGTAACCAA CAAAATGCCG CCAATAGGTT TTCAATTCGT
TTACAGGGTA AAAATGGTGG TGAGATAGCC ACTCAAGGCC AACTTCAGCT CTCCCCCCTA
AATATCACGG GATCACTACA GCTTAAGGAG ATAGCTTTAC CTGAGTTTTG GTCATTTATC
TCAGAAGAGT TTCAGGCTCA CTTAGACACA GGCAAGTTTA ATTTCAGCAC AGATTTTGCC
CTGTCAATGA GTGAGACTTC GGTTGAGCAG CCACTAATCC TGACAACAAG TCAGGGACAG
TTTGCACTAA AAGATATCCT ATTTACTCAT GAAAATCGTC CACTTATCTC TCTGCCACTT
TTTGCAGCAG AAAATATCGC ACTAAATCTA AGTCAGCAGC AACTGCAGAT CTCACGGCTC
TATAGTGAGA AATTGACTTT AGATGGTCAT GTCTCTGCTG CAGGTCTAGA CCTTGTGCCA
CTGTTTATGC CTAATTTTAT CTCGACTAAG ACAAAAGAGC CTGGCGACAC ACAAGCTGCA
GAGGTAAACA CTGAAACATC TACACCTTTA CCGAAGTTAG CTGTCATCGA TGAGCCTAGC
GTCGAAACGG CGTCTACTTG GTCCGCGATA ATTGACAAAG TCGAACTCAA AGAGTTCGAT
ATCAAGGTAA CAGAAAACCT TGCGTCAGAT AACACTCAAT GGCAGGTTTC TCCCCTAAAC
CTCACAACAG GTAAGATCTA TTCTGACCTT AGATCTCCGG TGCAATATCA ACTAGATTTA
GCCATTAATA GCGCAGGACA GTTCAATGCT AGTGGGGAGT TAAATCTCAA ACTGCAACGT
ATAGAGAGTA AAATATCTCT TGAAGATTTC TCACTTCCCC AGCTTCAGGC TTATCTCTCT
CCTTACCTCA ACATACAGTT AGAGCAAGGT AGGTTAGATG CACATGGCGT TGTTAAAGCC
AGCTCTATCG ATGATCTAGT CTTCAGTGGT GATGCGGCGA TTAATGATCT ATTCGTCAAA
GATACGATAC AAAACAAAGC GCTATTAAAA TGGCAATCTA TGACTCTCAG TCAGCTGAGT
TTAAATCAAA GTAAACACCT CTTATCCATC GATGCGATAG ATTTTGTCAA ACCTTACAGT
CGACTCATCA TTGCAGAGGA TAAATCCACT AATATTGGCG GATTGGTAAT TGCTCAGGCT
AGCGATGAAG CAAATCAAGA GAGGCTAGCG AAGTCAAAGC AAGATAAGCT GAAAATTCTG
ATTGGAAAGC TTGGGTTTAC TCAAGGCTCG ACCTTCTTCG CCGATAATTC ACTCACTCCC
AACTTTGCAG CCAGTATTGA ACAACTAGAG GGGCAAGTGA GTCAGTTATC TTCAACATCA
ACATCACCTG CTAAAGTTGA TATCAAAGGA AAAATTGATA AATATGCGCC TGTTACACTC
AAAGGAGAGA TAAACCCACT ACTTGAGATG CCCTATCTGG ATCTTGCCCT AAAATTTGCA
AATGTCGAAT TAACCTCTGT CAATCCCTAC TCAGGCACCT ACGCAGGCTA CTATATCGAT
AAAGGTCAGC TTTCTTTAGA TCTAAACTAC CAGTTAGAGG AGAACAAACT GCAAGGCAGC
AACCATATGG TGGTCGACCA ACTGACCTTA GGAGAGCGAA GTGACAGTAG TTTAGCCACT
AGCCTGCCTG TCACCCTTGC GATTGCACTA CTACAAGACA GACACGGTGT TATCGACCTT
GGTCTTGATG TCTCAGGCGA TCTGGACTCG CCAGAGTTCA GTTTCGGTGG CATTATTTTG
ACCGCATTTA CCAATGTGAT CACTAAAGCC GTAACCGCCC CCTTTAGCCT GCTTTCTGGG
ATCTTTGGCG ACAGTGACGC GTTAGATAGT ATCGCCTTTG GCTCCGGTTT AGCCAAGATT
AGCGACAGCG AAGCTGACAA ACTTGAAACC TTAACCAAAG CACTAACAGA ACGTCCTAAG
CTGACCTTAA GTGTTGAAGG TGCCATTGAC CCAATTGCAG ATAGCCAAGA GCTTAAAATG
CATATGCTCA CTCAAAAATT GGCTCAAATC GGAAAAATTA CTCCCGATGT CATGCCACGT
AAACTGTCAG CAAGCCAGTT TCCAACTCAA GGCCCTCTAT CAGATGCGCT TATCTCCCTC
TATGAGAGTG AAGTTGGCAG TAAAGCTGAT GAGATAAAAG CACAGATAAT GGCAAAAAAT
GAACAAGATG AAACTCAATT AAGTGATGAA GAGCTCAATA TCCAATGGCA TATCGCCCTG
TATAATTTAG TCTTGAATCA TCAAGAGGTC GATGAGCTTA TGTTAGGGGA TCTAGCCACC
GAACGAGCCC TTGCGGTCAA GGCACACTTA GTGGATATCA ATAAATTGGA ACCATCACGG
ATATTCCTTC TCGATAGCCG CATTGATACT AATCAAGGTG CTCAGGAAGC AATATTAACC
TTAGGGGCAG AGTGA
|
|---|
| Protein sequence | MSAKPKKAIN LKQIYRQLPR YQKLLVLVLA LYLSFVTLLG LLIPSIAEQQ LPIQLSETLK
RPVSLKDVSI NPFNLHVSLT ELHIFEEDNT KFTGFAALNF ELSFWHSLIN GAISIKDVTL
TGPYLLAERL SQTEGAEFNF SDIITEMTNT TTSAPSEENP ATLPHIMVER LAIVSGNLNF
IDTLTDSQLS YPDINLDIKG FDTLTEISNQ QNAANRFSIR LQGKNGGEIA TQGQLQLSPL
NITGSLQLKE IALPEFWSFI SEEFQAHLDT GKFNFSTDFA LSMSETSVEQ PLILTTSQGQ
FALKDILFTH ENRPLISLPL FAAENIALNL SQQQLQISRL YSEKLTLDGH VSAAGLDLVP
LFMPNFISTK TKEPGDTQAA EVNTETSTPL PKLAVIDEPS VETASTWSAI IDKVELKEFD
IKVTENLASD NTQWQVSPLN LTTGKIYSDL RSPVQYQLDL AINSAGQFNA SGELNLKLQR
IESKISLEDF SLPQLQAYLS PYLNIQLEQG RLDAHGVVKA SSIDDLVFSG DAAINDLFVK
DTIQNKALLK WQSMTLSQLS LNQSKHLLSI DAIDFVKPYS RLIIAEDKST NIGGLVIAQA
SDEANQERLA KSKQDKLKIL IGKLGFTQGS TFFADNSLTP NFAASIEQLE GQVSQLSSTS
TSPAKVDIKG KIDKYAPVTL KGEINPLLEM PYLDLALKFA NVELTSVNPY SGTYAGYYID
KGQLSLDLNY QLEENKLQGS NHMVVDQLTL GERSDSSLAT SLPVTLAIAL LQDRHGVIDL
GLDVSGDLDS PEFSFGGIIL TAFTNVITKA VTAPFSLLSG IFGDSDALDS IAFGSGLAKI
SDSEADKLET LTKALTERPK LTLSVEGAID PIADSQELKM HMLTQKLAQI GKITPDVMPR
KLSASQFPTQ GPLSDALISL YESEVGSKAD EIKAQIMAKN EQDETQLSDE ELNIQWHIAL
YNLVLNHQEV DELMLGDLAT ERALAVKAHL VDINKLEPSR IFLLDSRIDT NQGAQEAILT
LGAE
|
|---|
| |