Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2749 |
Symbol | asnB |
ID | 6117057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3367455 |
End bp | 3369128 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641634289 |
Product | asparagine synthetase B |
Protein accession | YP_001761120 |
Protein GI | 170727094 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0661444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0184808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTCAA TTTTCGCCAT TTTAGATATT AAATCCGACT CAAGCCCACT GCGCCAAGTT GCTCTGGAGA TGTCTAAGCT AATGCGCCAT CGCGGTCCAG ACTGGTCTGG AATTTACAGC TGCGACAGAG CAATCCTTGC CCATGAACGT TTAGCTATCG TAGACATAGA ACATGGTGCC CAACCTCTGC TAAGTGAAGA TGAGAGCATC ATACTGGCGG TCAATGGTGA GATTTATAAC CACAAGGATC TCAAGGCTGA ACTCGGCGAT AAATACAGCT ATCAAACCAA CTCTGATTGT GAAGTTATCT TAGCTTTATA CCAAGAGTAC GGTACTGAAT TTCTAGACAA GCTAAACGGG ATTTTTGCAT TCGTTCTCTA TGATAAAAAT AAAGATAGCT ACCTGATTGG TCGTGATCAT ATGGGGATCA TCCCACTTTA CTCAGGTCTT GATACTGAGG GGAACTTCTA TATTGCTTCT GAGATGAAAG CCTTGATGCC CGTTTGTAAA ACCATTGAAG AGTTCAAACC TGGTCACTAC ATTAGCAGCA GCGAAGGTGA GTCTGGCGTC TATACTCACT ATTACCAACG CGATTGGAAA GAGTTCGACG CAGTAAAAGA TAACCCTGCC AGTGTCGATG AGCTAAGAGA AGCACTGGAA GCGTCAGTTA AACGTCAACT AATGTCCGAT GTACCCTATG GTGTACTACT CTCTGGCGGA TTGGACTCTT CGGTTATCTC TGCGATCACT CAGACATTTG CAAAACGTCG TATCGAAGAT GATGATGAAA GCGGCGCTTG GTGGCCACAG CTTCACTCCT TTGCTGTTGG CCTTGAAGGC GCACCAGATC TTATCGCAGC ACAAAAGGTA GCCGATGCAA TAGGCACCAT CCACCATGAG ATCACTTTTA CCTTCCAAGA TGGCATCGAT GCCATCAAAG ATGTGATTTA TCACCTTGAA ACCTATGACG TAACGACTAT TCGTGCAGCC ACACCTATGT ACCTAATGGC AAGAAAGATT AAGGCCATGG GCATAAAAAT GGTGCTATCT GGAGAGGGAG CCGATGAGCT ATTTGGCGGC TACCTCTATT TCCATAAAGC ACCAAATGCA CAAGCGTTTC ACGAAGAGCT GGTCCGAAAA CTCGATAAGT TACATCTGTT CGATTGCCTT CGCGCCAATA AGGCGATGGC CGCCTGGGGA TTAGAAGCCC GTGTTCCTTT TCTCGACAAA GAGTTTATGG ATGTTGCGAT GCGCATTAAC CCTGAAGCTA AGATGTCTAA AGATGGCAAG ATTGAGAAAC ATATTCTGCG CCAAGCGTTT GAGCATAAGT TGCCTCAAGA GGTTGCATGG CGTCAGAAAG AGCAGTTCAG TGATGGAGTT GGCTACTCTT GGATAGATGG CTTGAAAGAC TTAGCTGCTG ATAAAGTTGA CGATCTCAAA CTCGCCAATG CCAAGTTCAG GTTCCCCTAC AACACGCCAG AGACAAAGGA AGCTTACTAT TATCGCTGCT TTTTTGAGGA ACACTTCCCA CTCGCCAGTG CAGCAGAGAC AGTGCCTGGC GGAAAATCGG TAGCGTGCTC GACTCCAGAA GCACTCGCTT GGGATGAAAG TCTGCAGGGC ATTATTGACC CATCGGGCCG CGCAGTTCAA TCTGTTCATG AGAGTGCCTA TTAA
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Protein sequence | MCSIFAILDI KSDSSPLRQV ALEMSKLMRH RGPDWSGIYS CDRAILAHER LAIVDIEHGA QPLLSEDESI ILAVNGEIYN HKDLKAELGD KYSYQTNSDC EVILALYQEY GTEFLDKLNG IFAFVLYDKN KDSYLIGRDH MGIIPLYSGL DTEGNFYIAS EMKALMPVCK TIEEFKPGHY ISSSEGESGV YTHYYQRDWK EFDAVKDNPA SVDELREALE ASVKRQLMSD VPYGVLLSGG LDSSVISAIT QTFAKRRIED DDESGAWWPQ LHSFAVGLEG APDLIAAQKV ADAIGTIHHE ITFTFQDGID AIKDVIYHLE TYDVTTIRAA TPMYLMARKI KAMGIKMVLS GEGADELFGG YLYFHKAPNA QAFHEELVRK LDKLHLFDCL RANKAMAAWG LEARVPFLDK EFMDVAMRIN PEAKMSKDGK IEKHILRQAF EHKLPQEVAW RQKEQFSDGV GYSWIDGLKD LAADKVDDLK LANAKFRFPY NTPETKEAYY YRCFFEEHFP LASAAETVPG GKSVACSTPE ALAWDESLQG IIDPSGRAVQ SVHESAY
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