| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2746 |
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| Symbol | |
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| ID | 6117054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3362333 |
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| End bp | 3363079 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634286 |
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| Product | UMP phosphatase |
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| Protein accession | YP_001761117 |
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| Protein GI | 170727091 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000506878 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000386966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAATA TTATTTGCGA CATCGACGGC GTTTTACTGC ATAACAACCA GCTTATTCCC
GGTAGTGACA AATTTATTCA CCGCGTGCTT GAACAAGGTA ATCCTTTGGT TGTGCTCACC
AATTATCCAG TACAGACGGG AAAGGATCTG CAAAATAGAC TCGGGGCTGC AGGTATAAAG
ATCCCAGAAG AGTGCTTCTA CACCTCTGCC ATGGCCACCG CTGACTTCTT AAAACACCAA
ACGGGCAGTA AAGCCTATGT CATTGGTGAA GGTGCCCTCA CCCATGAGCT CTATAAAGCA
GGCTTTACCA TCACAGATAT CAATCCCGAC TTTGTTATCG TCGGAGAGAC CCGCTCCTAT
AACTGGGAGA TGATCCACAA GGCGGCTAAA TTTGTTGCCG AAGGTGCACG ATTTATCGCC
ACAAATCCGG ATACTCATGG CCCCTCCCAC AGCCCAGCTT GTGGTGCACT GTGTGCTCCA
ATTGAACGTA TTAGTGGTCG ATTACCATTT TATGTTGGAA AGCCTAGCTC CTGGATCATA
CGTTCAGCAC TAAATCACAT TGATGGTCAC TCAGATAACA CCATTATTAT CGGTGATAAT
ATGAAAACGG ATATTTTAGC GGGGTTTCAG GCAGGTCTAG AGACAGTATT GGTCACAAGC
GGTGTTAGTC AACTTAACGA TGTGGAGCTT GAACCATTCA GACCGAACCA TATCTTCCCC
TGCGCCGGTG ACATTGACGT TGTCTAA
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| Protein sequence | MKNIICDIDG VLLHNNQLIP GSDKFIHRVL EQGNPLVVLT NYPVQTGKDL QNRLGAAGIK
IPEECFYTSA MATADFLKHQ TGSKAYVIGE GALTHELYKA GFTITDINPD FVIVGETRSY
NWEMIHKAAK FVAEGARFIA TNPDTHGPSH SPACGALCAP IERISGRLPF YVGKPSSWII
RSALNHIDGH SDNTIIIGDN MKTDILAGFQ AGLETVLVTS GVSQLNDVEL EPFRPNHIFP
CAGDIDVV
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