| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2744 |
|---|
| Symbol | |
|---|
| ID | 6117052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3360433 |
|---|
| End bp | 3361470 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641634284 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_001761115 |
|---|
| Protein GI | 170727089 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000181532 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000473524 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACTC CTACCCAGCT GAGCTATAAA GATGCAGGTG TTGATATCGA CGCCGGAAAT
GCACTTGTTG ATAATATTAA GACTGCAGTG AAACGTACCC ACCGTCCAGA AGTTATGGGC
AACCTAGGTG GATTTGGTGC TCTATGTGAG CTGCCAACTA AGTACAAACA CCCAGTTCTG
GTTTCTGGCA CCGATGGTGT TGGTACTAAG TTAAGATTGG CCATTGACTA TAAAAAGCAT
GACACAGTAG GTATCGACCT TGTTGCCATG TGTTCTAACG ATCTTATTGT CTCTGGTGCT
GAGCCACTTT TCTTCCTCGA TTACTATGCC ACTGGCAAGT TAGATGTCGA TGCTGCGACA
GCTGTCGTTA AGGGCATTGC CGAGGGGTGT GTGCAATCAG GCTGTGCATT AATCGGTGGT
GAAACTGCTG AAATGCCAGG CATGTATGAA GGCGATGACT ACGACTTGGC TGGTTTCTGT
GTTGGCGTCG TTGAAAAAGA AGAGATTATC GATGGCACTA AGGTTGTTGC TGGTGACTCT
CTTATCGCAC TAGGGGCGAG CGGTCCACAC TCAAACGGTT TCTCTTTGAT CCGTAAAGTA
CTGGAAGTCA GTGGCGCCAA CCCAGAGCAG GAACTTGAAG GTAAGGCATT AATTGACCAC
CTACTTGAGC CTACAAAAAT TTATGTTAAG TCGCTACTTA AGCTACTAGA ACAAACTGAA
GTCCATGCAA TGGCGCACAT CACAGGCGGT GGATTCTGGG AGAATATCCC ACGTGTTCTT
CCTGATGATT GTAAAGCGGT TATCCAAGGT GACTCATGGC AGTGGCCATC GATCTTCAAC
TGGTTAATGG AAAACGGCAA CATCGCAGAA TTTGAAATGT ACCGCACATT TAACTGTGGC
GTAGGTATGG TTGTTGCCTT ACCAAGCGAC AAAGTTGAAG CTGCACTGAC ACTGCTTAAT
GCTGAAGGTG AGAAAGCCTG GTTAATCGGT GAAATTGCTA AACGTGATGA TAGCGAAGAG
CAAGTGGAGA TCCTGTAA
|
|---|
| Protein sequence | MSTPTQLSYK DAGVDIDAGN ALVDNIKTAV KRTHRPEVMG NLGGFGALCE LPTKYKHPVL
VSGTDGVGTK LRLAIDYKKH DTVGIDLVAM CSNDLIVSGA EPLFFLDYYA TGKLDVDAAT
AVVKGIAEGC VQSGCALIGG ETAEMPGMYE GDDYDLAGFC VGVVEKEEII DGTKVVAGDS
LIALGASGPH SNGFSLIRKV LEVSGANPEQ ELEGKALIDH LLEPTKIYVK SLLKLLEQTE
VHAMAHITGG GFWENIPRVL PDDCKAVIQG DSWQWPSIFN WLMENGNIAE FEMYRTFNCG
VGMVVALPSD KVEAALTLLN AEGEKAWLIG EIAKRDDSEE QVEIL
|
|---|
| |