| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2743 |
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| Symbol | upp |
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| ID | 6117051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3359593 |
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| End bp | 3360219 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634283 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_001761114 |
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| Protein GI | 170727088 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000380844 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000408607 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG TCGAAGTTAA GCATCCTTTA GTTCGTCATA AAATCGGGTT AATGCGTGAA
GGTGATATCA GCACTAAACG TTTTCGTGAA CTAGCAGCAG AGGTGGGTAG TCTTTTAACT
TATGAAGCAA CCGCTGATTT TGAAACTGAA GCTGTGACCA TTGAAGGTTG GAACGGTCCT
GTTGAAGTTG AGCAGATCAA AGGTAAGAAA GTAACAGTTG TCCCAATTCT TCGTGCCGGT
CTTGGCATGA TGGATGGCGT TCTTGAGCAT ATTCCAAGTG CACGTATCTC AGTTGTCGGT
ATGTACCGTG ATGAAGAGAC ACTTGAGCCT GTTCCCTATT TTGAAAAGCT AGCCAGTGAT
ATGCCTTCTC GTATCGCACT CGTCGTTGAC CCTATGTTGG CAACAGGTGG CTCAATGATT
TCAACTATCG ACCTGTTAAA AGAGCGTGGT TGCACTTCAA TTAAAGCACT CGTGCTAGTG
GCCGCACCAG AAGGTGTTGC TGCCCTTGAG AAAGCACACC CAGATATTGA GCTTTATACC
GCTTCTATTG ATGATTGCCT AAATGATCAA GGTTATATTC TTCCTGGCCT TGGTGATGCA
GGTGATAAGA TTTTCGGTAC TAAATAA
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| Protein sequence | MKVVEVKHPL VRHKIGLMRE GDISTKRFRE LAAEVGSLLT YEATADFETE AVTIEGWNGP
VEVEQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG MYRDEETLEP VPYFEKLASD
MPSRIALVVD PMLATGGSMI STIDLLKERG CTSIKALVLV AAPEGVAALE KAHPDIELYT
ASIDDCLNDQ GYILPGLGDA GDKIFGTK
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