Gene Swoo_2735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2735 
Symbol 
ID6117043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3350493 
End bp3350891 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content43% 
IMG OID641634275 
Producttol-pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001761106 
Protein GI170727080 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.234099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000101572 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTCGTT GGCCCATTTC TGTCTATTAC GAAGATACCG ATGCTGGTGG CGTCGTTTAT 
CATTCAAATT ATCTTAATTT TTTTGAACGT GCCCGCACTG AGTGGTTGAA GGCGATTGGC
GTTAAGCAGA CTGTGCTATT AGCAGAAGAT ATTGCATTTG TTGTCAAACG CGCTGAACTC
GACTTTTGCC GTGCAGCTCG TTTTGAACAG GACCTTTTTG TAGAAACGCT TGTCATAGAG
ATGAAGAGGG CGTCGCTAAC ATTCCAGCAA CGCTTAGTTG ATCAACAAGG TGTCGTGTAT
TGTGAAGGCA AGATTAACGT GGCTTGCATT ACCTTATCAC GTATGAAACC AAGAGCTATT
CCCCAAAATA TTGTTCAGGA GTTAAAAAGT GGAAGCTGA
 
Protein sequence
MFRWPISVYY EDTDAGGVVY HSNYLNFFER ARTEWLKAIG VKQTVLLAED IAFVVKRAEL 
DFCRAARFEQ DLFVETLVIE MKRASLTFQQ RLVDQQGVVY CEGKINVACI TLSRMKPRAI
PQNIVQELKS GS