Gene Swoo_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2726 
Symbol 
ID6117025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3340292 
End bp3342034 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content43% 
IMG OID641634257 
Producttype III restriction protein res subunit 
Protein accessionYP_001761097 
Protein GI170727071 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.219655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000185767 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAATTAA GAGACTACCA ACAGCAAGCT GTAGATGCCG CAGTAAAACA TTTCAGATCC 
AGTAGTGACT CCGCGGTACT GGTGCTTCCT ACGGGAGCAG GTAAAAGTAT TGTCATTGCC
GAACTTGCCC GAATCGCCAA CGGCCGCGTG CTGGTACTCA CCCATGTAAA AGAGTTAGTT
GCTCAAAATG CTGAGAAAGT CGGGATATTG ACCACAGCAG CAAGTATCTA CTCCGCAGGA
CTTAAACAAA AATCAACCAA AAACAAAACA GTGGTAGCAA GTATTCAATC AGCTGTTAGA
GCACCAGAGC AGTTTAATGA GCCTTTCTCT TTAGTGATCA TCGATGAGTG CCACAGGGTC
ACTTCTGAGG AAACAAGCCA ATATCAGAAG CTATTAAGCC ATCTTAAACA AAAGAATTCC
AAAATAAAGC TACTCGGGCT CACTGCAACA CCCTACCGTT TAGATCTTGG CTGGATCTAT
CACCAGCACT ACCACGGCAA GATGGGCAAT CCAGATAAAC CTGTATTTCA GCAGTGTATA
TTTGAGCTCC CTATGCGGCC CCTAATTAAA CGTGGTTATC TAAGCGTCCC TAAGATGTTT
GATGGACTCT CTGTTCAATA TGACTTTAGT GCGTTACAGC AATCTGTAAA CGGTGATTAT
CAAGAGAAAG AGGTTAATGA TCTACTTAGT CATTGCGGAC GCGCAACCAC AGCGATTATT
AAGCAACTTA TTGAGATAGG CTCAGGTAGA CAAGGGGTCA TCATCTTCGC AGCCACAGTG
CGCCATGCTG AAGAGATTAT GAAGCGATTA TGTGATGAGA AGGCTGCACT TATCACCGCA
AAGACCAGTA CAGAAGATAG AGATAACATC ATCACCTCAT TTAAGGCTCG TGAGATCAAA
TATCTGGTAA ATGTTGCCGT ACTCACCACA GGCTTCGATG CTCCTCACGT GGATCTGATC
GCCATCTTAA GGCCCACAGC ATCAGTGAGC CTATTTCAGC AGATGGTGGG CCGAGGACTT
AGGATCTGTG AAGGTAAAGA TGAGTGCCTA GTCATCGACT ATGCCGCCAA TGGTTACGAT
CTTTACTTCC CTGAAGTCGG TCAACATAAA CCCAATAGCA AGAGTGTCCC AGTTCAGGTG
CACTGCCCTG TATGTAATTT TGCCAATATA TTCTGGGGAT TAGTAGATAA TGATGGTGAT
ATCATCGAAC ACTTTGGTCG GCGATGCCAA GCATTGATTC AGCGAGATGG AGATAAAGCC
CAGTGTGACT TTCGTTTCCG TTCTAAATCT TGCCCTAATT GTGGTGAAGA AAATGATATT
GCGGCCAAAA TTTGTCATCA CTGCGACTCA ATGTTAATTG ACCCCGACAA ACGACTTAAA
GAGGTATTAC AGCAGAAACA TCACCACCTG TTTAAATGCC AAACAATGCT CTTTGTGAAA
GATGGCGAGC GACTAAAGGT TCAATATATT GATCAAGATG GTAATGACTA TTGTCGTTAC
TTCAACTTTA AAACAGAGGG CCAACGACGA GCCTTCTATG CGGTATTTGT CATATCTCAC
ACTCGAACTC CGGGATTAAA GCATCAACAA TACAAAAGTG CAGAGCAAGT TATTCAAGCC
AGAGACAAGT TTAGAATGCC AGATCTTCTG TTATTAAAGA AAGACAAAAA AGGTTGGGAT
TTAGTTGAAA CCTTTTTTGA TTACCGTGGG CGTTATCAAA CTGAGAATAA GTTTATTCAA
TAG
 
Protein sequence
MQLRDYQQQA VDAAVKHFRS SSDSAVLVLP TGAGKSIVIA ELARIANGRV LVLTHVKELV 
AQNAEKVGIL TTAASIYSAG LKQKSTKNKT VVASIQSAVR APEQFNEPFS LVIIDECHRV
TSEETSQYQK LLSHLKQKNS KIKLLGLTAT PYRLDLGWIY HQHYHGKMGN PDKPVFQQCI
FELPMRPLIK RGYLSVPKMF DGLSVQYDFS ALQQSVNGDY QEKEVNDLLS HCGRATTAII
KQLIEIGSGR QGVIIFAATV RHAEEIMKRL CDEKAALITA KTSTEDRDNI ITSFKAREIK
YLVNVAVLTT GFDAPHVDLI AILRPTASVS LFQQMVGRGL RICEGKDECL VIDYAANGYD
LYFPEVGQHK PNSKSVPVQV HCPVCNFANI FWGLVDNDGD IIEHFGRRCQ ALIQRDGDKA
QCDFRFRSKS CPNCGEENDI AAKICHHCDS MLIDPDKRLK EVLQQKHHHL FKCQTMLFVK
DGERLKVQYI DQDGNDYCRY FNFKTEGQRR AFYAVFVISH TRTPGLKHQQ YKSAEQVIQA
RDKFRMPDLL LLKKDKKGWD LVETFFDYRG RYQTENKFIQ