Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2726 |
Symbol | |
ID | 6117025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3340292 |
End bp | 3342034 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634257 |
Product | type III restriction protein res subunit |
Protein accession | YP_001761097 |
Protein GI | 170727071 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.219655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000185767 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAATTAA GAGACTACCA ACAGCAAGCT GTAGATGCCG CAGTAAAACA TTTCAGATCC AGTAGTGACT CCGCGGTACT GGTGCTTCCT ACGGGAGCAG GTAAAAGTAT TGTCATTGCC GAACTTGCCC GAATCGCCAA CGGCCGCGTG CTGGTACTCA CCCATGTAAA AGAGTTAGTT GCTCAAAATG CTGAGAAAGT CGGGATATTG ACCACAGCAG CAAGTATCTA CTCCGCAGGA CTTAAACAAA AATCAACCAA AAACAAAACA GTGGTAGCAA GTATTCAATC AGCTGTTAGA GCACCAGAGC AGTTTAATGA GCCTTTCTCT TTAGTGATCA TCGATGAGTG CCACAGGGTC ACTTCTGAGG AAACAAGCCA ATATCAGAAG CTATTAAGCC ATCTTAAACA AAAGAATTCC AAAATAAAGC TACTCGGGCT CACTGCAACA CCCTACCGTT TAGATCTTGG CTGGATCTAT CACCAGCACT ACCACGGCAA GATGGGCAAT CCAGATAAAC CTGTATTTCA GCAGTGTATA TTTGAGCTCC CTATGCGGCC CCTAATTAAA CGTGGTTATC TAAGCGTCCC TAAGATGTTT GATGGACTCT CTGTTCAATA TGACTTTAGT GCGTTACAGC AATCTGTAAA CGGTGATTAT CAAGAGAAAG AGGTTAATGA TCTACTTAGT CATTGCGGAC GCGCAACCAC AGCGATTATT AAGCAACTTA TTGAGATAGG CTCAGGTAGA CAAGGGGTCA TCATCTTCGC AGCCACAGTG CGCCATGCTG AAGAGATTAT GAAGCGATTA TGTGATGAGA AGGCTGCACT TATCACCGCA AAGACCAGTA CAGAAGATAG AGATAACATC ATCACCTCAT TTAAGGCTCG TGAGATCAAA TATCTGGTAA ATGTTGCCGT ACTCACCACA GGCTTCGATG CTCCTCACGT GGATCTGATC GCCATCTTAA GGCCCACAGC ATCAGTGAGC CTATTTCAGC AGATGGTGGG CCGAGGACTT AGGATCTGTG AAGGTAAAGA TGAGTGCCTA GTCATCGACT ATGCCGCCAA TGGTTACGAT CTTTACTTCC CTGAAGTCGG TCAACATAAA CCCAATAGCA AGAGTGTCCC AGTTCAGGTG CACTGCCCTG TATGTAATTT TGCCAATATA TTCTGGGGAT TAGTAGATAA TGATGGTGAT ATCATCGAAC ACTTTGGTCG GCGATGCCAA GCATTGATTC AGCGAGATGG AGATAAAGCC CAGTGTGACT TTCGTTTCCG TTCTAAATCT TGCCCTAATT GTGGTGAAGA AAATGATATT GCGGCCAAAA TTTGTCATCA CTGCGACTCA ATGTTAATTG ACCCCGACAA ACGACTTAAA GAGGTATTAC AGCAGAAACA TCACCACCTG TTTAAATGCC AAACAATGCT CTTTGTGAAA GATGGCGAGC GACTAAAGGT TCAATATATT GATCAAGATG GTAATGACTA TTGTCGTTAC TTCAACTTTA AAACAGAGGG CCAACGACGA GCCTTCTATG CGGTATTTGT CATATCTCAC ACTCGAACTC CGGGATTAAA GCATCAACAA TACAAAAGTG CAGAGCAAGT TATTCAAGCC AGAGACAAGT TTAGAATGCC AGATCTTCTG TTATTAAAGA AAGACAAAAA AGGTTGGGAT TTAGTTGAAA CCTTTTTTGA TTACCGTGGG CGTTATCAAA CTGAGAATAA GTTTATTCAA TAG
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Protein sequence | MQLRDYQQQA VDAAVKHFRS SSDSAVLVLP TGAGKSIVIA ELARIANGRV LVLTHVKELV AQNAEKVGIL TTAASIYSAG LKQKSTKNKT VVASIQSAVR APEQFNEPFS LVIIDECHRV TSEETSQYQK LLSHLKQKNS KIKLLGLTAT PYRLDLGWIY HQHYHGKMGN PDKPVFQQCI FELPMRPLIK RGYLSVPKMF DGLSVQYDFS ALQQSVNGDY QEKEVNDLLS HCGRATTAII KQLIEIGSGR QGVIIFAATV RHAEEIMKRL CDEKAALITA KTSTEDRDNI ITSFKAREIK YLVNVAVLTT GFDAPHVDLI AILRPTASVS LFQQMVGRGL RICEGKDECL VIDYAANGYD LYFPEVGQHK PNSKSVPVQV HCPVCNFANI FWGLVDNDGD IIEHFGRRCQ ALIQRDGDKA QCDFRFRSKS CPNCGEENDI AAKICHHCDS MLIDPDKRLK EVLQQKHHHL FKCQTMLFVK DGERLKVQYI DQDGNDYCRY FNFKTEGQRR AFYAVFVISH TRTPGLKHQQ YKSAEQVIQA RDKFRMPDLL LLKKDKKGWD LVETFFDYRG RYQTENKFIQ
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