| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2718 |
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| Symbol | |
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| ID | 6117017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3325960 |
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| End bp | 3327177 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634249 |
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| Product | chitin-binding domain-containing protein |
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| Protein accession | YP_001761089 |
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| Protein GI | 170727063 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.279999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00241809 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTTCT CTAATTTTAT TAACATCGAG AAATTTATGA AACAGATAAC ATGTTTATCC
TCTCTACTTG GTGTCTTGCT TATTAGTAGC GTGTTAACTC AAGAGTTGCA TGCCCACGGC
TATATGGATT CACCAAAAGC TCGTCAACAG TTCTGTGTTG ATGATGGCGG CTATTGGTGG
CCAGATGATG GCTCCGCAAT CCCTAACTTG GCTTGTAGGG CGGCCTTTTT AGAGACTGGA
ACTAAGCAGT TGGTTCAAAA CAATGAATTT TCTGAAAATG TGGTTGATTA TCATAATCTC
GCAGCAGTAA AACAGGCGAT CCCAAACGGT CAATTGTGCG CGGGTGGAGA TAGTGAAAAG
TCCGGTATGG ATACGCCTTC TATGCATTGG CAACGAACAG ATGTAACTCC TGATAACAAT
GGACAAGTCT CCATTATATT TGATGCTCAC ACGCCCCATA ACCCGAGTTT CTGGGAGTTT
TATCTGTCTG ATGAGACCTT TGATGTTGCA AATGAGGTGC TCAGCTGGGA GAAGCTGGAG
CTAATAACTC AGGTAGGCAA TGTTGGAGTC AGTGAGGTCA ATGGGAAAAA GGTATACCAG
ATAATGATCT CTCTTCCTTT GGGTAGAGTA GGGCCCGCAA CTCTGTATAC CCGTTGGCAG
CGTGAAGATG CTGCTGGTGA AGGTTTTTAC AACTGCAGTG ACATCAACAT CATTAATGAT
TCTCAGCCTC AGGAGTGGGT AGTATTAGAG CAATATATTG CTAATGGGTT AACCGCTAAT
AAGGGGGATG AGGTCTGGTT TCGTCTCTTT AGTGCACAAG GTGATGAGCT AGTGTTTGAT
AAGTTGCAGG TGACAGCGGC TAACTTACAG ACAGAGTTGT GGGCTCGTCA GCTAGCCGAG
TCTGTGATGT CACAACATGG TGAATTAGTG CAGGTTGGTG TTAAGGGAGC CGGTGGTGAG
CTGGTTTACT CTGATGACTT AGCGCTAAAT AAAGTCTGGA GTAAACAGTT AGGTATCACC
TTTAGGCTCG ATGTGAAAAC CATCAGTGAG CCACCGAGTT GTCAGTTAAT GCCATGGGAT
GTGGCTACTG TTTATAACAC AGGTGGAGAG GTCGTCTATG ACTCTATTCG TTACCAAGCA
CAGTGGTGGA CGAAAGGGGA TGTGCCATCA AGCTCAGGTG AATGGGGCGT GTGGAAAAAT
TTAGGTCCTT GCCTCTAG
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| Protein sequence | MSFSNFINIE KFMKQITCLS SLLGVLLISS VLTQELHAHG YMDSPKARQQ FCVDDGGYWW
PDDGSAIPNL ACRAAFLETG TKQLVQNNEF SENVVDYHNL AAVKQAIPNG QLCAGGDSEK
SGMDTPSMHW QRTDVTPDNN GQVSIIFDAH TPHNPSFWEF YLSDETFDVA NEVLSWEKLE
LITQVGNVGV SEVNGKKVYQ IMISLPLGRV GPATLYTRWQ REDAAGEGFY NCSDINIIND
SQPQEWVVLE QYIANGLTAN KGDEVWFRLF SAQGDELVFD KLQVTAANLQ TELWARQLAE
SVMSQHGELV QVGVKGAGGE LVYSDDLALN KVWSKQLGIT FRLDVKTISE PPSCQLMPWD
VATVYNTGGE VVYDSIRYQA QWWTKGDVPS SSGEWGVWKN LGPCL
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