| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2717 |
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| Symbol | |
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| ID | 6117016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3324808 |
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| End bp | 3325872 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634248 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001761088 |
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| Protein GI | 170727062 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.143553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0025212 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATTA AAACAGATGA ACTACGCACC ACTTTATTAT GTAAAGCTAT CTCTCCTGCT
AAGTTAGCCT CTGAGTTTCC GTTAACACAA GATGCTGCCG ATTACTTAGT ACAGCAACGC
CGTGAAGTAG AAGCCATTTT AAAAGGCGAT GATCAACGAC TATTAGTGAT CATCGGCCCA
TGCTCAATCC ATGACACGAC AGCTGCAATA GATTATGCAA AGCGTCTTGC TGCACTGCAT
CAAGAGTTAA AGGATGATCT ATGCATTTTA ATGCGTGTTT ACTTTGAGAA GCCTAGAACG
ACTGTCGGCT GGAAAGGTTT AATTTCAGAT CCGGATCTCG ATGGCAGCTT TAATGCCAAC
AAAGGCTTAC GTTTAGCACG TCAATTATTA CAAGAGATCA CTGAACTTAA ACTGCCTATC
GCCACTGAAT TTCTCGATAT GGTGAACGGT CAATATATTG CTGACCTCAT CACTTGGGGC
GCAGTGGGAG CCCGTACTAC TGAGAGCCAG ATCCACCGCG AAATGGCATC GGCCCTCTCC
TGCCCTGTCG GTTTTAAGAA TGGTACCGAT GGCAATATTA ATATCGCTAT CGATGCGGTG
CGCGCAGCTA AAGAGCCACA TATTTTCTAC TCACCAGATA AAGATGGCGC CATGGCAGTG
TATCGCACCA GCGGTAACCC TTATGGCCAC ATCATTCTAC GTGGCGGTAA ACAGCCAAAT
TACCATGCAG AAGATATCAA TGCGGCAGCA GAGCAGTTAA GTGATGTTGG GGTTTCTCAT
CGTATGGTCG TGGATTTCAG CCACGGTAAT AGTCAGAAGA AACACGCTCA GCAGTTGAAT
GTAGCCGATA GTATTATGGA GCAGATGCGC CAAGGTTCAA CCGCTATCGC AGGTATTATG
GCTGAAAGTT TTATTGAGGA GGGCAACCAA AAAGTCGTTA CTGGTGAGCC TCTTGTCTAT
GGTAAGAGCA TCACTGATGC CTGTCTGCAT TGGGAAGACT CTGAAACACT ACTTCGTGCA
CTGGCAAAAG CATCAAGAGA CAGGATTAAC TTGCTTAACA AGTAA
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| Protein sequence | MTIKTDELRT TLLCKAISPA KLASEFPLTQ DAADYLVQQR REVEAILKGD DQRLLVIIGP
CSIHDTTAAI DYAKRLAALH QELKDDLCIL MRVYFEKPRT TVGWKGLISD PDLDGSFNAN
KGLRLARQLL QEITELKLPI ATEFLDMVNG QYIADLITWG AVGARTTESQ IHREMASALS
CPVGFKNGTD GNINIAIDAV RAAKEPHIFY SPDKDGAMAV YRTSGNPYGH IILRGGKQPN
YHAEDINAAA EQLSDVGVSH RMVVDFSHGN SQKKHAQQLN VADSIMEQMR QGSTAIAGIM
AESFIEEGNQ KVVTGEPLVY GKSITDACLH WEDSETLLRA LAKASRDRIN LLNK
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