| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2705 |
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| Symbol | mnmA |
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| ID | 6117004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3309839 |
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| End bp | 3310972 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634236 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001761076 |
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| Protein GI | 170727050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0144876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAA TCGAACCAAC TGCGGCATTA ATCGAACCCA CTGCTAATAA AAAAGTCATT
GTCGGCATGT CCGGCGGTGT TGACTCATCA GTTTCGGCTT ACTTGTTACT TAAACAGGGC
TATCAAGTCG AAGGTCTTTT CATGAAAAAC TGGGAAGAAG ATGACACCGA TGAATATTGT
GCTGCTGCAG ATGACCTTAA AGACGCGCAA GCGGTATGCG ATAAGCTGGG CATAAAACTG
CACACAGTAA ACTTTGCCTC TGAATATTGG GACAATGTTT TCGAATACTT TCTAGCAGAG
TACAAGGCAG GCAGAACGCC AAATCCAGAT ATTATCTGTA ATAAAGAGAT AAAATTTAAG
GCATTTCTTG AGTTTGCAGA TGATATTTTA GACGCTGACT ACATCGCCAT GGGGCACTAT
GTTCGCCGTA GTGATGACAG CGGTCAAAGC CAGATGCTAC GAGGTATCGA CGGCAATAAA
GATCAAAGCT ATTTTCTCTA TACACTGAGC CATGAGCAAG TTTCCCGCTC ACTATTTCCT
GTCGGTGAGC TTGAAAAAAG TGAAGTCAGG GAGATTGCCA AAGAGATGGG ACTTATCACC
CATGATAAAA AAGATAGTAC TGGGATCTGT TTTATCGGTG AGCGTAAGTT CACTGACTTC
CTCAGCACCT TCCTGCCTGC ACAGCCTGGT AATATTGAGA CTGCTGAAGG TGAAGTCATT
GGAACCCATC AAGGCTTGAT GTATCACACC CTTGGACAGC GTAAAGGTCT AGGGATCGGT
GGAATGAAAA ACAGTAACGA TGATCCTTGG TATGTGGTTG ATAAAGAGAT GGACCGCAAT
GTATTAGTTG TGGGTCAAGG TGGTAACCAC CCTCGCCTTA TGTCGACGGG TTTTTATGCT
GACCAACTTC ACTGGGTTGA CCGTATTGGT CCTGACAATG GCGCAAAAAT TACAGTTAAG
ACTCGTTACC GTCAAAGAGA CGTAGCCTGC AGCTTACATT ACGATGGCGA AGACAGGGTA
AAAGTACTCT TTGATGAACC TGTTGCAGCA GTGACACCAG GCCAATCAGC CGTTTTTTAT
GATGCCGAAG TATGCTTAGG CGGCGGTATC ATCGATTCAC TAATCAGAGA ATAA
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| Protein sequence | MAIIEPTAAL IEPTANKKVI VGMSGGVDSS VSAYLLLKQG YQVEGLFMKN WEEDDTDEYC
AAADDLKDAQ AVCDKLGIKL HTVNFASEYW DNVFEYFLAE YKAGRTPNPD IICNKEIKFK
AFLEFADDIL DADYIAMGHY VRRSDDSGQS QMLRGIDGNK DQSYFLYTLS HEQVSRSLFP
VGELEKSEVR EIAKEMGLIT HDKKDSTGIC FIGERKFTDF LSTFLPAQPG NIETAEGEVI
GTHQGLMYHT LGQRKGLGIG GMKNSNDDPW YVVDKEMDRN VLVVGQGGNH PRLMSTGFYA
DQLHWVDRIG PDNGAKITVK TRYRQRDVAC SLHYDGEDRV KVLFDEPVAA VTPGQSAVFY
DAEVCLGGGI IDSLIRE
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