Gene Swoo_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2704 
Symbol 
ID6117003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3309217 
End bp3309693 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content44% 
IMG OID641634235 
ProductNUDIX hydrolase 
Protein accessionYP_001761075 
Protein GI170727049 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAA GGTACAGACC CAATGTGACT GTAGCTTGTA TTGTGCAGTG TCAAGATAAG 
TATCTTATGG TTGAGGAGCT CATCGATGGG CAAACTCGTT ACAATCAGCC CGCAGGACAC
TTAGAGAAAG GTGAATCAAT CACTCAAGCT TGCGAGCGAG AGGTATTTGA GGAAACAGGG
ATCAAGCTTA AAGTTCAGGA GCTAGTTGGG ATCTATCAAT TCAATCCTGA TGACACGCTA
GCCTTTCTTA GGTTTACCTT CTTTGCTCAA CTTTCAAGCT GTGTAAATGC TACGCCTCAA
GATACAGATA TTCAAGCTGC ACACTGGTTA ACTTTTGATG AAATTCAGGC GCTAGCGGCT
AAATTAAGAA GCCCATTAGT ACTCACCAGT CTCGATGACG CCAGAAATAA AACACACTAT
CCGCTAGAAC TGCTCAATAG CCAGTATCTC AGGTTAGCTC CAAGCCAGAA TGCGTGA
 
Protein sequence
MKPRYRPNVT VACIVQCQDK YLMVEELIDG QTRYNQPAGH LEKGESITQA CEREVFEETG 
IKLKVQELVG IYQFNPDDTL AFLRFTFFAQ LSSCVNATPQ DTDIQAAHWL TFDEIQALAA
KLRSPLVLTS LDDARNKTHY PLELLNSQYL RLAPSQNA