Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2704 |
Symbol | |
ID | 6117003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3309217 |
End bp | 3309693 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634235 |
Product | NUDIX hydrolase |
Protein accession | YP_001761075 |
Protein GI | 170727049 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0109153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAA GGTACAGACC CAATGTGACT GTAGCTTGTA TTGTGCAGTG TCAAGATAAG TATCTTATGG TTGAGGAGCT CATCGATGGG CAAACTCGTT ACAATCAGCC CGCAGGACAC TTAGAGAAAG GTGAATCAAT CACTCAAGCT TGCGAGCGAG AGGTATTTGA GGAAACAGGG ATCAAGCTTA AAGTTCAGGA GCTAGTTGGG ATCTATCAAT TCAATCCTGA TGACACGCTA GCCTTTCTTA GGTTTACCTT CTTTGCTCAA CTTTCAAGCT GTGTAAATGC TACGCCTCAA GATACAGATA TTCAAGCTGC ACACTGGTTA ACTTTTGATG AAATTCAGGC GCTAGCGGCT AAATTAAGAA GCCCATTAGT ACTCACCAGT CTCGATGACG CCAGAAATAA AACACACTAT CCGCTAGAAC TGCTCAATAG CCAGTATCTC AGGTTAGCTC CAAGCCAGAA TGCGTGA
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Protein sequence | MKPRYRPNVT VACIVQCQDK YLMVEELIDG QTRYNQPAGH LEKGESITQA CEREVFEETG IKLKVQELVG IYQFNPDDTL AFLRFTFFAQ LSSCVNATPQ DTDIQAAHWL TFDEIQALAA KLRSPLVLTS LDDARNKTHY PLELLNSQYL RLAPSQNA
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