Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2689 |
Symbol | |
ID | 6116988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3294919 |
End bp | 3295668 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634220 |
Product | fatty acid metabolism regulator |
Protein accession | YP_001761060 |
Protein GI | 170727034 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000449481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.614012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATAG TCCAAAAAGC TCCGACCGTG GCAAAAAACA AAGATATTAT CGAAGCCAAG GGACCTGCGA GTTTTGCTGA GAAGTATATT GTCCGTTCTA TCTGGGAGGA GAAGTTTCCG CCAGGTTCAA TATTACCGGC TGAGAGAGAG TTATCTGAGC TGATAGGCGT GACGCGAACC ACACTACGTG AAGTGCTACA GCGTTTAGCG CGTGACGGTT GGTTGACGAT TCAACACGGT AAACCCACTA AAGTGAACGA CATTTGGGAA ACCTCAGGGT TAAATGTACT GGAGACGATT GCAGATTTAA ATCCTGCTGG TGAGCCTGTT TTATTAGAGC AGTTGCTTTC TGCCCGAACC AATATCAGTG CTATCTATTT TAAAGGCGCA GTACGTCATA ATCCTGAAAA AGTGTTAGAG GCGTTAAAAG AGATCACCCA GCTTGATAAC GATCCTAAAG CTTATGTAGA GTTCGACTAC CAGTTACACC ACACTTTAGC CTATAACTCT GGAAATCCAC TTTATGTGTT GATTTTGAAT GGCTTTAAAG GTCTTTATAG TCGTGTTGGT CAAGATTATT TTGCTATTGA TAAAGCCCGT GAGCTGGCCT ATGAGTTTTA TGAAGCGCTG CAACAGCTTG CTGAAGAGAA AAACCATAAT GCGATACCAG CATTGATGCG CAGCTATGGT ATTAATAGTG GCAAGGTATG GCAAAGATTT AAGAGTAGTC AGGCTCAACT GACTGATTGA
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Protein sequence | MTIVQKAPTV AKNKDIIEAK GPASFAEKYI VRSIWEEKFP PGSILPAERE LSELIGVTRT TLREVLQRLA RDGWLTIQHG KPTKVNDIWE TSGLNVLETI ADLNPAGEPV LLEQLLSART NISAIYFKGA VRHNPEKVLE ALKEITQLDN DPKAYVEFDY QLHHTLAYNS GNPLYVLILN GFKGLYSRVG QDYFAIDKAR ELAYEFYEAL QQLAEEKNHN AIPALMRSYG INSGKVWQRF KSSQAQLTD
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