Gene Swoo_2689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2689 
Symbol 
ID6116988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3294919 
End bp3295668 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content43% 
IMG OID641634220 
Productfatty acid metabolism regulator 
Protein accessionYP_001761060 
Protein GI170727034 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID[TIGR02812] fatty acid metabolism transcriptional regulator FadR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000449481 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.614012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAG TCCAAAAAGC TCCGACCGTG GCAAAAAACA AAGATATTAT CGAAGCCAAG 
GGACCTGCGA GTTTTGCTGA GAAGTATATT GTCCGTTCTA TCTGGGAGGA GAAGTTTCCG
CCAGGTTCAA TATTACCGGC TGAGAGAGAG TTATCTGAGC TGATAGGCGT GACGCGAACC
ACACTACGTG AAGTGCTACA GCGTTTAGCG CGTGACGGTT GGTTGACGAT TCAACACGGT
AAACCCACTA AAGTGAACGA CATTTGGGAA ACCTCAGGGT TAAATGTACT GGAGACGATT
GCAGATTTAA ATCCTGCTGG TGAGCCTGTT TTATTAGAGC AGTTGCTTTC TGCCCGAACC
AATATCAGTG CTATCTATTT TAAAGGCGCA GTACGTCATA ATCCTGAAAA AGTGTTAGAG
GCGTTAAAAG AGATCACCCA GCTTGATAAC GATCCTAAAG CTTATGTAGA GTTCGACTAC
CAGTTACACC ACACTTTAGC CTATAACTCT GGAAATCCAC TTTATGTGTT GATTTTGAAT
GGCTTTAAAG GTCTTTATAG TCGTGTTGGT CAAGATTATT TTGCTATTGA TAAAGCCCGT
GAGCTGGCCT ATGAGTTTTA TGAAGCGCTG CAACAGCTTG CTGAAGAGAA AAACCATAAT
GCGATACCAG CATTGATGCG CAGCTATGGT ATTAATAGTG GCAAGGTATG GCAAAGATTT
AAGAGTAGTC AGGCTCAACT GACTGATTGA
 
Protein sequence
MTIVQKAPTV AKNKDIIEAK GPASFAEKYI VRSIWEEKFP PGSILPAERE LSELIGVTRT 
TLREVLQRLA RDGWLTIQHG KPTKVNDIWE TSGLNVLETI ADLNPAGEPV LLEQLLSART
NISAIYFKGA VRHNPEKVLE ALKEITQLDN DPKAYVEFDY QLHHTLAYNS GNPLYVLILN
GFKGLYSRVG QDYFAIDKAR ELAYEFYEAL QQLAEEKNHN AIPALMRSYG INSGKVWQRF
KSSQAQLTD