| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2687 |
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| Symbol | |
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| ID | 6116986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3289035 |
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| End bp | 3290888 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634218 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001761058 |
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| Protein GI | 170727032 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATATAC GTACATTAGC ATCATGGCCA TTTAGCCTTA TCTTAATCAT CAGTTTACTG
TGCCCTCTCT CAGCACAGGC AGAAGATTGG CTTAAATTAG ACATTAGTGG CGTTTCAGGG
GAATTAGATA GAAATATCAA AGCTCACTTA GGCCAATTAC CAAACTCAAA CGTGCAGCGG
CGTGCCTTTA TCTTTAACGC AGAGGATAAC ACCTCGGCCG CACTTCACTC CCTCGGTTAC
TACCATGGCA AAGTGGAACA GAAAGTATTA TCACCCAAGA AGGGAGCCTG GACATTAAGC
CTTATTGTAA CGCCTGGGGC TCCCACATTA ATCGAATGGG TAGATATTGA TCTCGATGGA
GAGATCCTCA ATGACCCTAT CATTAGCGAT TGGCTCAATG GACTGAGCAT TAAGCCGGGT
GATACCCTTA ATCACGGTGT TTATGAACAG GTAAAATCTC AGCTTGTCAC GCTGGCACTC
GCCCGTGGTT ACTTTGATGG TAAATACATA AAATCGGCTA TCACAATCAA TCGCGATCTC
AACACCGCTC GTATCACGCT CCACTATGAC TCTGGTCAAC GTTACCGTAT CGGTACGGTC
AACTTCGAGG GACAGACACT CAATGATGAT CTGATGAATG GTTTAGTGCC GTTCAAGACT
GACAGTCCAT ACAGTACAGC AAACCTTGGA GCACTAAATA GAGAGCTGCT GAACACTGGG
TACTTCTCCA ACATTAAAGT GCTCCCTCAG GTGGATAAAG CAGTCGACTT GAATGTTCCG
ATTAAAGTTG AGCTCTCTCC CAGACCAAGC CACTCAATAG AGCTCGGTTT AGGTGTCGAT
ATCGGTAACA CCACAGAGAA GGAGTTCGAA CCTAGAGTCA GAGTCACCTG GCGAACCCCG
CAGATAAACC GTTACGGACA TTCTCAGGAG ACCAGCTTAG AGTGGGCTCC CGATAAACCT
AAATTTTTAA GCACCTACAC CATACCGCTT ACTCACCCTC TCAATGATCA ATTAAAAATA
AGAGTGGGGA TGTTAAGGGA TAAATACGGT GTCACTCAGG TCTTTGACCC TGAAGATAAC
ACCTTTAGGA ATACTGGGGA GCTTGAGGGT AATAAACGTC TATTCGGGAT CATTCGCCAA
CAAAAACTAG AGAGCCAATG GTTATTTAGC TACTCAGTTG AGGCGATCCG TGAGTATTAC
ACTCAATCTG AAATCGACTA CGATCCCACC TTTGTCCTGT TTGGCAGTAG CATCTCCAAG
ACCATACGAG GAGACAGCAG TTTAGATCCT AAATCAGGTT TCTTTCAGCA CTACAGCATT
GAATATGCCG ATCCGTCATT AGGCTCTACG GTGCGCCTTG CTCGGCTCCA AACTAAATAT
AAGTGGATCG ATACTTTCTT CGAAAAACAC AGAATCGTAT CTAGACTCGA TTTAGGAGTC
AATTTGGCAG CTGATGAAGA TCTGCCATTT ATCCCCCCTT CACTGCGCTA CTTTGCCGGT
GGCGATCAGA GTATCCGTGG TTATAGTTAT CAAGAGCTAG GGCCCTATTT TGAATACACC
AGCAGTGACG ATAAGCTAAT AAGGCAGGTG ATCGGTGGAC GCTACCTAAT GGTAGGCAGT
CTAGAGTATC AGTATTATCT GACTCCATCT TGGCGTGTGG CAACTTTTGT CGATGCAGGT
AATGCCTTCG ATGTGGATCA AATTGATCCT ATTATCTCTG TTGGTGGAGG TATTCACTGG
ATCACCCCTA TCGGTCCCAT CAAGCTTGAT GTCGGTGTCG GCCTTAAAGG GACTGAAACT
GACACAGTTT CACGCCCATG GCGTATCCAC TTAACCATGG GGTCAGAGTT ATGA
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| Protein sequence | MHIRTLASWP FSLILIISLL CPLSAQAEDW LKLDISGVSG ELDRNIKAHL GQLPNSNVQR
RAFIFNAEDN TSAALHSLGY YHGKVEQKVL SPKKGAWTLS LIVTPGAPTL IEWVDIDLDG
EILNDPIISD WLNGLSIKPG DTLNHGVYEQ VKSQLVTLAL ARGYFDGKYI KSAITINRDL
NTARITLHYD SGQRYRIGTV NFEGQTLNDD LMNGLVPFKT DSPYSTANLG ALNRELLNTG
YFSNIKVLPQ VDKAVDLNVP IKVELSPRPS HSIELGLGVD IGNTTEKEFE PRVRVTWRTP
QINRYGHSQE TSLEWAPDKP KFLSTYTIPL THPLNDQLKI RVGMLRDKYG VTQVFDPEDN
TFRNTGELEG NKRLFGIIRQ QKLESQWLFS YSVEAIREYY TQSEIDYDPT FVLFGSSISK
TIRGDSSLDP KSGFFQHYSI EYADPSLGST VRLARLQTKY KWIDTFFEKH RIVSRLDLGV
NLAADEDLPF IPPSLRYFAG GDQSIRGYSY QELGPYFEYT SSDDKLIRQV IGGRYLMVGS
LEYQYYLTPS WRVATFVDAG NAFDVDQIDP IISVGGGIHW ITPIGPIKLD VGVGLKGTET
DTVSRPWRIH LTMGSEL
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